AT3G61910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAC domain protein 66 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
NAC transcription factor NST2. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls. NST2 promoter was particularly strong in anther tissue. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
NAC domain protein 66 (NAC066); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, anther dehiscence, secondary cell wall biogenesis; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT2G46770.1); Has 2909 Blast hits to 2904 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2909; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:22929193..22930407 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37863.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.04 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 334 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNISVNGQSQ VPPGFRFHPT EEELLKYYLR KKISNIKIDL DVIPDIDLNK LEPWDIQEMC KIGTTPQNDW YFYSHKDKKY PTGTRTNRAT TVGFWKATGR 101: DKTIYTNGDR IGMRKTLVFY KGRAPHGQKS DWIMHEYRLD ESVLISSCGD HDVNVETCDV IGSDEGWVVC RVFKKNNLCK NMISSSPASS VKTPSFNEET 201: IEQLLEVMGQ SCKGEIVLDP FLKLPNLECH NNTTITSYQW LIDDQVNNCH VSKVMDPSFI TSWAALDRLV ASQLNGPNSY SIPAVNETSQ SPYHGLNRSG 301: CNTGLTPDYY IPEIDLWNEA DFARTTCHLL NGSG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)