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AT5G03720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : heat shock transcription factor A3
Curator
Summary (TAIR10)
Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence.
Computational
Description (TAIR10)
heat shock transcription factor A3 (HSFA3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to heat, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A1D (TAIR:AT1G32330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:17025eggNOG:COG5169eggNOG:KOG0627EMBL:AK117318
EMBL:AL162506EMBL:CP002688EnsemblPlants:AT5G03720EnsemblPlants:AT5G03720.1
entrez:831749Gene3D:1.10.10.10GeneID:831749Genevisible:Q8GYY1
GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351
GO:GO:0006355GO:GO:0009408GO:GO:0010200GO:GO:0043565
Gramene:AT5G03720.1hmmpanther:PTHR10015hmmpanther:PTHR10015:SF164HOGENOM:HOG000112956
InParanoid:Q8GYY1InterPro:IPR000232InterPro:IPR011991InterPro:IPR027725
KEGG:ath:AT5G03720KO:K09419ncoils:CoilOMA:DWERLLM
PANTHER:PTHR10015PaxDb:Q8GYY1Pfam:PF00447Pfam:Q8GYY1
PhylomeDB:Q8GYY1PIR:T48399PRIDE:Q8GYY1PRINTS:PR00056
PRO:PR:Q8GYY1PROSITE:PS00434ProteinModelPortal:Q8GYY1Proteomes:UP000006548
Reactome:R-ATH-3371453Reactome:R-ATH-3371511Reactome:R-ATH-3371568Reactome:R-ATH-3371571
RefSeq:NP_195992.2scanprosite:PS00434SMART:SM00415SMR:Q8GYY1
STRING:3702.AT5G03720.1SUPFAM:SSF46785TAIR:AT5G03720tair10-symbols:AT-HSFA3
tair10-symbols:HSFA3UniGene:At.45813UniProt:Q8GYY1
Coordinates (TAIR10) chr5:-:971913..973683
Molecular Weight (calculated) 46460.60 Da
IEP (calculated) 5.13
GRAVY (calculated) -0.74
Length 412 amino acids
Sequence (TAIR10)
(BLAST)
001: MSPKKDAVSK PTPISVPVSR RSDIPGSLYV DTDMGFSGSP LPMPLDILQG NPIPPFLSKT FDLVDDPTLD PVISWGLTGA SFVVWDPLEF ARIILPRNFK
101: HNNFSSFVRQ LNTYGFRKID TDKWEFANEA FLRGKKHLLK NIHRRRSPQS NQTCCSSTSQ SQGSPTEVGG EIEKLRKERR ALMEEMVELQ QQSRGTARHV
201: DTVNQRLKAA EQRQKQLLSF LAKLFQNRGF LERLKNFKGK EKGGALGLEK ARKKFIKHHQ QPQDSPTGGE VVKYEADDWE RLLMYDEETE NTKGLGGMTS
301: SDPKGKNLMY PSEEEMSKPD YLMSFPSPEG LIKQEETTWS MGFDTTIPSF SNTDAWGNTM DYNDVSEFGF AAETTSDGLP DVCWEQFAAG ITETGFNWPT
401: GDDDDNTPMN DP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)