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AT3G51910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : heat shock transcription factor A7A
Curator
Summary (TAIR10)
member of Heat Stress Transcription Factor (Hsf) family
Computational
Description (TAIR10)
heat shock transcription factor A7A (HSFA7A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to high light intensity, response to heat, regulation of cellular protein metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G63350.1); Has 2181 Blast hits to 2167 proteins in 235 species: Archae - 0; Bacteria - 14; Metazoa - 383; Fungi - 487; Plants - 788; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5169eggNOG:KOG0627EMBL:AK318746EMBL:AL049711
EMBL:CP002686EnsemblPlants:AT3G51910EnsemblPlants:AT3G51910.1entrez:824354
Gene3D:1.10.10.10GeneID:824354Genevisible:Q9SV12GO:GO:0003700
GO:GO:0005634GO:GO:0006351GO:GO:0009408GO:GO:0009644
GO:GO:0032268GO:GO:0043565hmmpanther:PTHR10015hmmpanther:PTHR10015:SF186
HOGENOM:HOG000237979InParanoid:Q9SV12InterPro:IPR000232InterPro:IPR011991
InterPro:IPR027725KEGG:ath:AT3G51910KO:K09419ncoils:Coil
OMA:KQRQMMSPANTHER:PTHR10015PaxDb:Q9SV12Pfam:PF00447
Pfam:Q9SV12PhylomeDB:Q9SV12PIR:T49070PRIDE:Q9SV12
PRINTS:PR00056PRO:PR:Q9SV12PROSITE:PS00434ProteinModelPortal:Q9SV12
Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371511Reactome:R-ATH-3371568
Reactome:R-ATH-3371571RefSeq:NP_190759.1scanprosite:PS00434SMART:SM00415
SMR:Q9SV12STRING:3702.AT3G51910.1SUPFAM:SSF46785TAIR:AT3G51910
tair10-symbols:AT-HSFA7Atair10-symbols:HSFA7AUniGene:At.43861UniProt:Q9SV12
Coordinates (TAIR10) chr3:+:19265294..19266619
Molecular Weight (calculated) 31777.80 Da
IEP (calculated) 6.43
GRAVY (calculated) -0.81
Length 272 amino acids
Sequence (TAIR10)
(BLAST)
001: MMNPFLPEGC DPPPPPQPME GLHENAPPPF LTKTFEMVDD PNTDHIVSWN RGGTSFVVWD LHSFSTILLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF
101: ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD
201: KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV ERELDDGFWE ELLSDESLAS TS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)