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AT2G26150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : heat shock transcription factor A2
Curator
Summary (TAIR10)
member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.
Computational
Description (TAIR10)
heat shock transcription factor A2 (HSFA2); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A6B (TAIR:AT3G22830.1); Has 2162 Blast hits to 2147 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 326; Fungi - 474; Plants - 849; Viruses - 0; Other Eukaryotes - 513 (source: NCBI BLink).
Protein Annotations
BioGrid:2507eggNOG:COG5169eggNOG:KOG0627EMBL:AC004747
EMBL:AK118744EMBL:CP002685EnsemblPlants:AT2G26150EnsemblPlants:AT2G26150.1
entrez:817155ExpressionAtlas:O80982Gene3D:1.10.10.10GeneID:817155
Genevisible:O80982GO:GO:0001666GO:GO:0003700GO:GO:0005634
GO:GO:0005737GO:GO:0006351GO:GO:0009408GO:GO:0009644
GO:GO:0010200GO:GO:0010286GO:GO:0034605GO:GO:0034620
GO:GO:0042542GO:GO:0043565GO:GO:0044212GO:GO:0045893
GO:GO:0071456hmmpanther:PTHR10015hmmpanther:PTHR10015:SF186HOGENOM:HOG000237979
InParanoid:O80982IntAct:O80982InterPro:IPR000232InterPro:IPR011991
InterPro:IPR027725iPTMnet:O80982MINT:MINT-8152620OMA:MMTFLAK
PANTHER:PTHR10015PaxDb:O80982Pfam:O80982Pfam:PF00447
PhylomeDB:O80982PIR:T02609PRIDE:O80982PRINTS:PR00056
PRO:PR:O80982PROSITE:PS00434ProteinModelPortal:O80982Proteomes:UP000006548
Reactome:R-ATH-3371453Reactome:R-ATH-3371511Reactome:R-ATH-3371568Reactome:R-ATH-3371571
RefSeq:NP_180184.1scanprosite:PS00434SMART:SM00415SMR:O80982
STRING:3702.AT2G26150.1SUPFAM:SSF46785TAIR:AT2G26150tair10-symbols:ATHSFA2
tair10-symbols:HSFA2UniGene:At.38933UniProt:O80982
Coordinates (TAIR10) chr2:+:11135856..11137217
Molecular Weight (calculated) 39116.40 Da
IEP (calculated) 4.90
GRAVY (calculated) -0.58
Length 345 amino acids
Sequence (TAIR10)
(BLAST)
001: MEELKVEMEE ETVTFTGSVA ASSSVGSSSS PRPMEGLNET GPPPFLTKTY EMVEDPATDT VVSWSNGRNS FVVWDSHKFS TTLLPRYFKH SNFSSFIRQL
101: NTYGFRKIDP DRWEFANEGF LAGQKHLLKN IKRRRNMGLQ NVNQQGSGMS CVEVGQYGFD GEVERLKRDH GVLVAEVVRL RQQQHSSKSQ VAAMEQRLLV
201: TEKRQQQMMT FLAKALNNPN FVQQFAVMSK EKKSLFGLDV GRKRRLTSTP SLGTMEENLL HDQEFDRMKD DMEMLFAAAI DDEANNSMPT KEEQCLEAMN
301: VMMRDGNLEA ALDVKVEDLV GSPLDWDSQD LHDMVDQMGF LGSEP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)