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AT3G14200.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G72416.2); Has 21914 Blast hits to 21906 proteins in 3169 species: Archae - 155; Bacteria - 8965; Metazoa - 3686; Fungi - 1997; Plants - 2132; Viruses - 13; Other Eukaryotes - 4966 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0714EMBL:AK227818EMBL:AP000600
EMBL:AY091107EMBL:AY122970EMBL:CP002686EnsemblPlants:AT3G14200
EnsemblPlants:AT3G14200.1entrez:820637Gene3D:1.10.287.110GeneID:820637
Gramene:AT3G14200.1hmmpanther:PTHR24078HOGENOM:HOG000283406InterPro:IPR001623
KEGG:ath:AT3G14200OMA:SSMEFVEPfam:PF00226Pfscan:PS50076
PhylomeDB:Q9LJG5PRINTS:PR00625PROSITE:PS50076Proteomes:UP000006548
RefSeq:NP_188036.1SMART:SM00271SMR:Q9LJG5STRING:3702.AT3G14200.1
SUPFAM:SSF46565TAIR:AT3G14200UniGene:At.23751UniProt:Q9LJG5
Coordinates (TAIR10) chr3:-:4712881..4714361
Molecular Weight (calculated) 25642.20 Da
IEP (calculated) 5.72
GRAVY (calculated) -0.95
Length 230 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSNSEKIN ENLYAVLGLK KECSKTELRS AYKKLALRWH PDRCSSMEFV EEAKKKFQAI QEAYSVLSDS NKRFLYDVGA YNTDDDDDQN GMGDFLNEMA
101: TMMNQSKPSD NNTGDSFEQL QDLFNEMFQG DAAAFPSSSS CSTSNFTSSR SFVFDTNSQR SSSFATSSMG MNNDPFGYDP RAHSFSLGVD HQQEFKKGKN
201: NGGRRNRRKN NVPSAGHETS SSNNYGVPTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)