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AT2G34090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : maternal effect embryo arrest 18
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
maternal effect embryo arrest 18 (MEE18); CONTAINS InterPro DOMAIN/s: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 (InterPro:IPR002882); Has 2113 Blast hits to 1989 proteins in 935 species: Archae - 0; Bacteria - 1707; Metazoa - 0; Fungi - 155; Plants - 41; Viruses - 1; Other Eukaryotes - 209 (source: NCBI BLink).
Protein Annotations
EMBL:BT002072EMBL:BT015789EMBL:CP002685EnsemblPlants:AT2G34090
EnsemblPlants:AT2G34090.1entrez:817970ExpressionAtlas:Q8H0T0GeneID:817970
Gramene:AT2G34090.1hmmpanther:PTHR31240HOGENOM:HOG000176669IntAct:Q8H0T0
InterPro:IPR002882Pfam:PF01933PhylomeDB:Q8H0T0Proteomes:UP000006548
RefSeq:NP_180956.2SMR:Q8H0T0SUPFAM:SSF142338TAIR:AT2G34090
tair10-symbols:MEE18UniGene:At.37857UniProt:Q8H0T0
Coordinates (TAIR10) chr2:-:14396283..14399170
Molecular Weight (calculated) 48929.60 Da
IEP (calculated) 7.13
GRAVY (calculated) -0.03
Length 445 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEICYFGGL VHYKSPSLPL SLHSLFRSKK PHYYNSTSLM AECLSSSTVE PPSLLVFSGG TGFNGVVEEL KKLTTRVAHV LPVSDDGGST AEIVRVLGGP
101: AVGDIRSRCL RLSDESTSEA LAVRRLLGHR LPIDAHQAKK DWYDIVEGNH SLWDGVSRPY SETIRAFLIY FQNEIHRRPN ERFCFSNGSI GNFFFAGARI
201: FFQSLDAAIF LFSRVSEIPC DSLVLPVIST NDRLTLGCEL QDGTIIRGQN EISHPTTGTT QTVDKRHCST SALPSKIKRV FYMSSEGNNL LHEVFPPVNP
301: TVLEQLRSVD CIVYAMGSLF TSICPSLVLL GVGEIISSRS CRKVLLLNGS QDRETSRFTA SCFVTAIADA LNRTHGDTNI RLKNPPGYYI NTLLVPKDGE
401: IAVDLKQLSE QGIYDVRVVE SVGDPKHGIL FNPSSLINTL AGLVE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)