AT2G34090.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : maternal effect embryo arrest 18 | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
maternal effect embryo arrest 18 (MEE18); CONTAINS InterPro DOMAIN/s: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 (InterPro:IPR002882); Has 2113 Blast hits to 1989 proteins in 935 species: Archae - 0; Bacteria - 1707; Metazoa - 0; Fungi - 155; Plants - 41; Viruses - 1; Other Eukaryotes - 209 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14396283..14399170 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 48929.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.13 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||
| Length | 445 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEICYFGGL VHYKSPSLPL SLHSLFRSKK PHYYNSTSLM AECLSSSTVE PPSLLVFSGG TGFNGVVEEL KKLTTRVAHV LPVSDDGGST AEIVRVLGGP 101: AVGDIRSRCL RLSDESTSEA LAVRRLLGHR LPIDAHQAKK DWYDIVEGNH SLWDGVSRPY SETIRAFLIY FQNEIHRRPN ERFCFSNGSI GNFFFAGARI 201: FFQSLDAAIF LFSRVSEIPC DSLVLPVIST NDRLTLGCEL QDGTIIRGQN EISHPTTGTT QTVDKRHCST SALPSKIKRV FYMSSEGNNL LHEVFPPVNP 301: TVLEQLRSVD CIVYAMGSLF TSICPSLVLL GVGEIISSRS CRKVLLLNGS QDRETSRFTA SCFVTAIADA LNRTHGDTNI RLKNPPGYYI NTLLVPKDGE 401: IAVDLKQLSE QGIYDVRVVE SVGDPKHGIL FNPSSLINTL AGLVE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)