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AT4G26510.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.977
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : uridine kinase-like 4
Curator
Summary (TAIR10)
One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.
Computational
Description (TAIR10)
uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12621 Blast hits to 12607 proteins in 2610 species: Archae - 215; Bacteria - 9586; Metazoa - 520; Fungi - 503; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G26510-MONOMERBioCyc:ARA:GQT-2843-MONOMEREC:2.4.2.9EC:2.7.1.48
eggNOG:COG0035eggNOG:COG0572eggNOG:KOG4203EMBL:AF116860
EMBL:AK228608EMBL:AL022223EMBL:AL161565EMBL:AY086133
EMBL:BT022059EMBL:CP002687EnsemblPlants:AT4G26510EnsemblPlants:AT4G26510.1
EnsemblPlants:AT4G26510.2entrez:828757Gene3D:3.40.50.2020Gene3D:3.40.50.300
GeneID:828757Genevisible:O65583GO:GO:0004845GO:GO:0004849
GO:GO:0005524GO:GO:0005525GO:GO:0005829GO:GO:0006206
GO:GO:0043097GO:GO:0044206GO:GO:0044211Gramene:AT4G26510.1
Gramene:AT4G26510.2gramene_pathway:2.4.2.9gramene_pathway:2.7.1.48gramene_pathway:PWYQT-4445
hmmpanther:PTHR10285hmmpanther:PTHR10285:SF75HOGENOM:HOG000262757InParanoid:O65583
InterPro:IPR000764InterPro:IPR006083InterPro:IPR027417InterPro:IPR029057
InterPro:IPR029930KEGG:00240+2.4.2.9+2.7.1.48KEGG:00240+2.7.1.48KEGG:00983+2.7.1.48
KEGG:ath:AT4G26510KO:K00876OMA:YDEHGAQPANTHER:PTHR10285:SF75
PaxDb:O65583Pfam:O65583Pfam:PF00485Pfam:PF14681
PhylomeDB:O65583PIR:T05053PRIDE:O65583PRINTS:PR00988
PRO:PR:O65583ProteinModelPortal:O65583Proteomes:UP000006548Reactome:R-ATH-73614
RefSeq:NP_567747.4RefSeq:NP_849448.4SMR:O65583STRING:3702.AT4G26510.1
SUPFAM:SSF52540SUPFAM:SSF53271TAIR:AT4G26510tair10-symbols:UKL4
TIGRfam:TIGR00235TIGRFAMs:TIGR00235UniGene:At.24428UniPathway:UPA00574
UniPathway:UPA00579UniProt:O65583
Coordinates (TAIR10) chr4:+:13384503..13387920
Molecular Weight (calculated) 52641.60 Da
IEP (calculated) 6.85
GRAVY (calculated) -0.14
Length 469 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSKSVVDMI EAASRAHFSG LHVNGHMNGL EPSALKETTS ASEDIQRQPF VIGVAGGAAS GKTTVCDMII QQLHDQRVVL INLDSFYHNL TEEELARVHE
101: YNFDHPDAFD TEHLLSCMEK LRQGQAVDIP KYDFKTYRSS VFRRVNPTDV IILEGILLFH DPRVRKLMNM KIFVCTDADV RLARRIKRDT VENGRDIGTV
201: LDQYSKFVKP AFDDFILPTK KYADIIIPRG GDNHVAIDLI VQHICTKLGQ HDLCKIYPNL YVIHSTFQIR GMHTLIRDSQ TTKHDFVFYS DRLIRLVVEH
301: GLGHLPFTEK QVITPTGCVY SGVDFCKRLC GVSVIRSGES MENALRACCK GIKIGKILIH REGDNGQQLV YEKLPNDISE RHVLLLDPIL GTGNSAVEAI
401: NLLISKGVPE GNIIFLNLIS APQGVHVVCK KFPRIKIVTS EIDNGLNEEF RVIPGMGEFG DRYFGTDDD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)