suba logo
AT2G38670.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:24124904 (2013): plastid
  • PMID:22923678 (2012): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:21311031 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphorylethanolamine cytidylyltransferase 1
Curator
Summary (TAIR10)
Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis.
Computational
Description (TAIR10)
phosphorylethanolamine cytidylyltransferase 1 (PECT1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidyltransferase-related (InterPro:IPR004821), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: phosphorylcholine cytidylyltransferase (TAIR:AT2G32260.1); Has 10984 Blast hits to 6001 proteins in 1666 species: Archae - 316; Bacteria - 5963; Metazoa - 682; Fungi - 448; Plants - 283; Viruses - 6; Other Eukaryotes - 3286 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G38670-MONOMERBioCyc:MetaCyc:AT2G38670-MONOMERBioGrid:3791EC:2.7.7.14
eggNOG:COG0615eggNOG:KOG2803EMBL:AC005499EMBL:AY092984
EMBL:AY128807EMBL:CP002685EnsemblPlants:AT2G38670EnsemblPlants:AT2G38670.1
entrez:818449Gene3D:3.40.50.620GeneID:818449Genevisible:Q9ZVI9
GO:GO:0004306GO:GO:0005739GO:GO:0006646GO:GO:0031307
Gramene:AT2G38670.1gramene_pathway:2.7.7.14gramene_pathway:PWY4FS-6hmmpanther:PTHR10739
hmmpanther:PTHR10739:SF29HOGENOM:HOG000187618InParanoid:Q9ZVI9InterPro:IPR004821
InterPro:IPR014729iPTMnet:Q9ZVI9KEGG:ath:AT2G38670KO:K00967
OMA:NDMTTEKPaxDb:Q9ZVI9Pfam:PF01467Pfam:Q9ZVI9
PhylomeDB:Q9ZVI9PIR:H84807PRIDE:Q9ZVI9PRO:PR:Q9ZVI9
ProteinModelPortal:Q9ZVI9Proteomes:UP000006548Reactome:R-ATH-1483213RefSeq:NP_181401.1
SMR:Q9ZVI9STRING:3702.AT2G38670.1SUPFAM:SSF52374SwissPalm:Q9ZVI9
TAIR:AT2G38670tair10-symbols:PECT1TIGRfam:TIGR00125TIGRFAMs:TIGR00125
TMHMM:TMhelixUniGene:At.37262UniPathway:UPA00558UniProt:Q9ZVI9
Coordinates (TAIR10) chr2:+:16168979..16171680
Molecular Weight (calculated) 46980.40 Da
IEP (calculated) 7.66
GRAVY (calculated) -0.23
Length 421 amino acids
Sequence (TAIR10)
(BLAST)
001: MVWEKEKIVG SCIVGGAAFA VGASFLHLFL KGELPLGLGL GLSCPWRILR KRKPVRVYMD GCFDMMHYGH CNALRQARAL GDQLVVGVVS DEEIIANKGP
101: PVTPLHERMT MVKAVKWVDE VISDAPYAIT EDFMKKLFDE YQIDYIIHGD DPCVLPDGTD AYALAKKAGR YKQIKRTEGV SSTDIVGRML LCVRERSISD
201: THSRSSLQRQ FSHGHSSPKF EDGASSAGTR VSHFLPTSRR IVQFSNGKGP GPDARIIYID GAFDLFHAGH VEILRRAREL GDFLLVGIHN DQTVSAKRGA
301: HRPIMNLHER SLSVLACRYV DEVIIGAPWE VSRDTITTFD ISLVVHGTVA ESDDFRKEED NPYSVPISMG IFQVLDSPLD ITTSTIIRRI VANHEAYQKR
401: NAKKEASEKK YYEQKSFVSG D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)