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AT3G02630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant stearoyl-acyl-carrier-protein desaturase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT5G16240.1); Has 934 Blast hits to 926 proteins in 218 species: Archae - 0; Bacteria - 428; Metazoa - 2; Fungi - 0; Plants - 447; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G02630-MONOMERBRENDA:1.14.19.2EC:1.14.19.2eggNOG:ENOG410IF20
eggNOG:ENOG410XPNSEMBL:AC021640EMBL:AY087294EMBL:AY099784
EMBL:AY128883EMBL:CP002686EnsemblPlants:AT3G02630EnsemblPlants:AT3G02630.1
entrez:820773Gene3D:1.10.620.20GeneID:820773Genevisible:Q9M879
GO:GO:0006633GO:GO:0009507GO:GO:0009570GO:GO:0045300
GO:GO:0046872Gramene:AT3G02630.1gramene_pathway:1.14.19.2gramene_pathway:PWY-5147
hmmpanther:PTHR31155hmmpanther:PTHR31155:SF4HOGENOM:HOG000035569InParanoid:Q9M879
InterPro:IPR005067InterPro:IPR009078InterPro:IPR012348iPTMnet:Q9M879
KEGG:ath:AT3G02630KO:K03921OMA:HEIAYCKPaxDb:Q9M879
Pfam:PF03405Pfam:Q9M879PhylomeDB:Q9M879PIRSF:PIRSF000346
PRIDE:Q9M879PRO:PR:Q9M879ProteinModelPortal:Q9M879Proteomes:UP000006548
RefSeq:NP_186912.1SMR:Q9M879STRING:3702.AT3G02630.1SUPFAM:SSF47240
TAIR:AT3G02630UniGene:At.18818UniGene:At.18819UniGene:At.67110
UniPathway:UPA00199UniProt:Q9M879
Coordinates (TAIR10) chr3:+:562164..564524
Molecular Weight (calculated) 45305.00 Da
IEP (calculated) 6.14
GRAVY (calculated) -0.48
Length 396 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMAMDRIVF SPSSYVYRPC QARGSRSSRV SMASTIRSAT TEVTNGRKLY IPPREVHVQV KHSMPPQKLE IFKSLEGWAD ETLLTYLKPV EKSWQPTDFL
101: PEPESEGFYD QVKELRERCK ELPDDYFVVL VGDMITEEAL PTYQTMLNTL DGVRDETGAS PTPWAIWTRA WTAEENRHGD LLNKYLYLSG RVDMRQIEKT
201: IQYLIGSGMD PKTENNPYLG FIYTSFQERA TFISHGNTAR LAKDRGDLKL AQICGTIAAD ERRHETAYTK IVEKLFEIDP DGTILGLADM MKKKISMPAH
301: LMYDGQDDNL FEHFSTVAQR LGVYTAKDYA DILEFLVERW NVETLTDLSS EGHRAQDFVC GLPARIRKIE ERAQGRAKEA AKNIPFSWIF GRNIRA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)