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AT3G07740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : homolog of yeast ADA2 2A
Curator
Summary (TAIR10)
encodes a transcriptional adaptor ADA2a that interacts with histone acetyltransferase GCN5 homolog and CBF1
Computational
Description (TAIR10)
homolog of yeast ADA2 2A (ADA2A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: response to cold; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Transcriptional adaptor 2 (InterPro:IPR016827), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), SWIRM (InterPro:IPR007526), SANT, eukarya (InterPro:IPR017884), Zinc finger, ZZ-type (InterPro:IPR000433); BEST Arabidopsis thaliana protein match is: homolog of yeast ADA2 2B (TAIR:AT4G16420.2); Has 1807 Blast hits to 1600 proteins in 233 species: Archae - 4; Bacteria - 36; Metazoa - 932; Fungi - 285; Plants - 203; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink).
Protein Annotations
BioGrid:5300eggNOG:COG5114eggNOG:KOG0457EMBL:AC009176
EMBL:AC013483EMBL:AF338769EMBL:AF360246EMBL:AY040045
EMBL:BX824819EMBL:CP002686EMBL:DR751119EMBL:DR751137
EnsemblPlants:AT3G07740EnsemblPlants:AT3G07740.1entrez:819965ExpressionAtlas:Q9SFD5
Gene3D:1.10.10.60GeneID:819965Genevisible:Q9SFD5GO:GO:0003677
GO:GO:0005634GO:GO:0006351GO:GO:0006357GO:GO:0008270
GO:GO:0016573hmmpanther:PTHR12374hmmpanther:PTHR12374:SF23HOGENOM:HOG000163455
InParanoid:Q9SFD5IntAct:Q9SFD5InterPro:IPR000433InterPro:IPR001005
InterPro:IPR007526InterPro:IPR009057InterPro:IPR016827InterPro:IPR017884
iPTMnet:Q9SFD5KEGG:ath:AT3G07740KO:K11314PaxDb:Q9SFD5
Pfam:PF00249Pfam:PF00569Pfam:Q9SFD5Pfscan:PS50135
Pfscan:PS50934Pfscan:PS51293PhylomeDB:Q9SFD5PIRSF:PIRSF025024
PRIDE:Q9SFD5PRO:PR:Q9SFD5PROSITE:PS01357PROSITE:PS50135
PROSITE:PS50934PROSITE:PS51293ProteinModelPortal:Q9SFD5Proteomes:UP000006548
RefSeq:NP_001078122.2RefSeq:NP_566317.1RefSeq:NP_974251.1scanprosite:PS01357
SMART:SM00291SMART:SM00717SMR:Q9SFD5STRING:3702.AT3G07740.4
SUPFAM:SSF46689SUPFAM:SSF57850TAIR:AT3G07740tair10-symbols:ADA2A
tair10-symbols:ATADA2Atair10-symbols:HAC10tair10-symbols:HXA02tair10-symbols:HXA2
UniGene:At.18344UniProt:Q9SFD5
Coordinates (TAIR10) chr3:-:2470014..2473062
Molecular Weight (calculated) 62045.30 Da
IEP (calculated) 7.86
GRAVY (calculated) -0.63
Length 548 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRSKLASRP AEEDLNPGKS KRKKISLGPE NAAASISTGI EAGNERKPGL YCCNYCDKDL SGLVRFKCAV CMDFDLCVEC FSVGVELNRH KNSHPYRVMD
101: NLSFSLVTSD WNADEEILLL EAIATYGFGN WKEVADHVGS KTTTECIKHF NSAYMQSPCF PLPDLSHTIG KSKDELLAMS KDSAVKTEIP AFVRLSPKEE
201: LPVSAEIKHE ASGKVNEIDP PLSALAGVKK KGNVPQAKDI IKLEAAKQQS DRSVGEKKLR LPGEKVPLVT ELYGYNLKRE EFEIEHDNDA EQLLADMEFK
301: DSDTDAEREQ KLQVLRIYSK RLDERKRRKE FVLERNLLYP DQYEMSLSAE ERKIYKSCKV FARFQSKEEH KELIKKVIEE HQILRRIEDL QEARTAGCRT
401: TSDANRFIEE KRKKEAEESM LLRLNHGAPG SIAGKTLKSP RGLPRNLHPF GSDSLPKVTP PRIYSGLDTW DVDGLLGADL LSETEKKMCN ETRILPVHYL
501: KMLDILTREI KKGQIKKKSD AYSFFKVEPS KVDRVYDMLV HKGIGDST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)