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AT1G74890.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : response regulator 15
Curator
Summary (TAIR10)
Encodes a nuclear response regulator that acts as a negative regulator in cytokinin-mediated signal transduction. Transcript accumulates in leaves and roots in response to cytokinin treatment.
Computational
Description (TAIR10)
response regulator 15 (ARR15); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 7 (TAIR:AT1G19050.1); Has 46084 Blast hits to 45371 proteins in 2654 species: Archae - 273; Bacteria - 40324; Metazoa - 30; Fungi - 580; Plants - 1499; Viruses - 4; Other Eukaryotes - 3374 (source: NCBI BLink).
Protein Annotations
BioGrid:29047eggNOG:COG5641eggNOG:KOG1601EMBL:AC008263
EMBL:AC013258EMBL:AF305720EMBL:CP002684EnsemblPlants:AT1G74890
EnsemblPlants:AT1G74890.1entrez:843828GeneID:843828Genevisible:Q7G8V2
GO:GO:0000156GO:GO:0005634GO:GO:0005737GO:GO:0006351
GO:GO:0006355GO:GO:0009735GO:GO:0009736Gramene:AT1G74890.1
hmmpanther:PTHR26402hmmpanther:PTHR26402:SF526HOGENOM:HOG000034820InParanoid:Q7G8V2
IntAct:Q7G8V2InterPro:IPR001789InterPro:IPR011006KEGG:ath:AT1G74890
KO:K14492OMA:RIEQCMIPaxDb:Q7G8V2Pfam:PF00072
Pfam:Q7G8V2Pfscan:PS50110PhylomeDB:Q7G8V2PRO:PR:Q7G8V2
PROSITE:PS50110ProteinModelPortal:Q7G8V2Proteomes:UP000006548RefSeq:NP_177627.1
SMART:SM00448SMR:Q7G8V2STRING:3702.AT1G74890.1SUPFAM:SSF52172
TAIR:AT1G74890tair10-symbols:ARR15UniGene:At.11589UniProt:Q7G8V2
Coordinates (TAIR10) chr1:-:28131590..28132710
Molecular Weight (calculated) 22401.80 Da
IEP (calculated) 5.90
GRAVY (calculated) -0.35
Length 206 amino acids
Sequence (TAIR10)
(BLAST)
001: MALRDLSSSL SSSSSPELHV LAVDDSFVDR KVIERLLKIS ACKVTTVESG TRALQYLGLD GDNGSSGLKD LKVNLIVTDY SMPGLTGYEL LKKIKESSAL
101: REIPVVIMSS ENIQPRIEQC MIEGAEEFLL KPVKLADVKR LKELIMRGGE AEEGKTKKLS PKRILQNDID SSPSSSSTSS SSSSHDVSSL DDDTPSSKRI
201: KLESRG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)