AT2G40670.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : response regulator 16 | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
response regulator 16 | ||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
response regulator 16 (RR16); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 17 (TAIR:AT3G56380.1); Has 23045 Blast hits to 22821 proteins in 2006 species: Archae - 145; Bacteria - 19499; Metazoa - 15; Fungi - 406; Plants - 1290; Viruses - 6; Other Eukaryotes - 1684 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:16970258..16971120 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 18269.40 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.92 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||
Length | 164 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MNSSGGSCSS LMDVVAYDHH LHHGHDEELH VLAVDDNLID RKLVERLLKI SCCKVTTAEN ALRALEYLGL GDQNQHIDAL TCNVMKVSLI ITDYCMPGMT 101: GFELLKKVKE SSNLREVPVV IMSSENIPTR INKCLASGAQ MFMQKPLKLA DVEKLKCHLM NCRS |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)