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AT1G19050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : response regulator 7
Curator
Summary (TAIR10)
Encodes a member of the Arabidopsis response regulator (ARR) family, most closely related to ARR15. A two-component response regulator protein containing a phosphate accepting domain in the receiver domain but lacking a DNA binding domain in the output domain. Involved in response to cytokinin and meristem stem cell maintenance. Arr7 protein is stabilized by cytokinin.
Computational
Description (TAIR10)
response regulator 7 (ARR7); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 15 (TAIR:AT1G74890.1); Has 53636 Blast hits to 53063 proteins in 2702 species: Archae - 285; Bacteria - 47261; Metazoa - 20; Fungi - 584; Plants - 1468; Viruses - 6; Other Eukaryotes - 4012 (source: NCBI BLink).
Protein Annotations
eggNOG:COG3706eggNOG:ENOG410IMXNEMBL:BT024585EnsemblPlants:AT1G19050
EnsemblPlants:AT1G19050.1entrez:838487ExpressionAtlas:Q2HIJ6GeneID:838487
GO:GO:0000160GO:GO:0005622Gramene:AT1G19050.1hmmpanther:PTHR26402
hmmpanther:PTHR26402:SF526InParanoid:Q9ZWS7IntAct:Q2HIJ6InterPro:IPR001789
InterPro:IPR011006KEGG:ath:AT1G19050KO:K14492OMA:MAVGEVM
PaxDb:Q2HIJ6Pfam:PF00072Pfam:Q9ZWS7Pfscan:PS50110
PhylomeDB:Q2HIJ6PRIDE:Q2HIJ6PROSITE:PS50110ProteinModelPortal:Q2HIJ6
RefSeq:NP_173339.1SMART:SM00448SMR:Q2HIJ6STRING:3702.AT1G19050.1
SUPFAM:SSF52172TAIR:AT1G19050tair10-symbols:ARR7UniGene:At.238
UniProt:Q2HIJ6UniProt:Q9ZWS7
Coordinates (TAIR10) chr1:-:6577919..6579078
Molecular Weight (calculated) 22801.60 Da
IEP (calculated) 6.29
GRAVY (calculated) -0.27
Length 206 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVGEVMRME IPAGGDLTVT TPELHVLAVD DSIVDRKVIE RLLRISSCKV TTVESGTRAL QYLGLDGGKG ASNLKDLKVN LIVTDYSMPG LSGYDLLKKI
101: KESSAFREVP VVIMSSENIL PRIQECLKEG AEEFLLKPVK LADVKRIKQL IMRNEAEECK ILSHSNKRKL QEDSDTSSSS HDDTSIKDSS CSKRMKSESE
201: NLFSLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)