suba logo
AT1G79690.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nudix hydrolase homolog 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nudix hydrolase homolog 3 (NUDT3); FUNCTIONS IN: dipeptidyl-peptidase activity, hydrolase activity; INVOLVED IN: proteolysis; LOCATED IN: cytosol, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), Peptidase M49, dipeptidyl-peptidase III (InterPro:IPR005317), NUDIX hydrolase domain (InterPro:IPR000086); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:29526EC:3.6.1.-eggNOG:COG0494eggNOG:ENOG410IFWH
EMBL:AC010793EMBL:AK117805EMBL:AY056442EMBL:AY120774
EMBL:BT000142EMBL:CP002684EnsemblPlants:AT1G79690EnsemblPlants:AT1G79690.1
entrez:844308Gene3D:3.90.79.10GeneID:844308Genevisible:Q8L831
GO:GO:0005773GO:GO:0005829GO:GO:0016787GO:GO:0046872
gramene_pathway:5.3.3.2gramene_pathway:NONMEVIPP-PWYgramene_pathway:PWY-5123gramene_pathway:PWY-922
hmmpanther:PTHR23422hmmpanther:PTHR23422:SF9HOGENOM:HOG000002707InParanoid:Q8L831
IntAct:Q8L831InterPro:IPR000086InterPro:IPR015797KEGG:ath:AT1G79690
OMA:AYNLPNDPaxDb:Q8L831Pfam:PF00293Pfam:PF03571
Pfam:Q8L831Pfscan:PS51462PhylomeDB:Q8L831PRIDE:Q8L831
PRO:PR:Q8L831PROSITE:PS51462ProteinModelPortal:Q8L831Proteomes:UP000006548
RefSeq:NP_565218.1SMR:Q8L831STRING:3702.AT1G79690.1SUPFAM:SSF55811
TAIR:AT1G79690tair10-symbols:atnudt3tair10-symbols:NUDT3UniGene:At.21701
UniGene:At.48398UniProt:Q8L831
Coordinates (TAIR10) chr1:+:29985360..29990171
Molecular Weight (calculated) 86861.10 Da
IEP (calculated) 5.10
GRAVY (calculated) -0.31
Length 772 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEEHFDVLT KSGEKTGVSK PRGEVHRDGD YHRAVHVWIF VETTQQLLLQ LRSDDKDSWP GQWDISSAGH ISAGDTSLLS AQRELEEELG VKLPKDAFEK
101: IFVFLQECVT NDGKFINNEF NDVYLVTILH PIPLEAFTLQ KEEVSAVKYV PYEEYRNFLS KEDPAYVPYD VNGEYGKLFD IIRQRCQVNT EARSLSLQKQ
201: LQRYSPVTLE AKLTELSEAD QKALGLIVKA AKIMDDIFYE QVWNSNPALR DWLKDHANAS KLDKLKWDYF TINKSPWSSL DENEAFLSTA DSAVKLLPGA
301: TKAIAGWKGL EYRAAFPVTK PPGANFYPPD MDKMEFTLWL NGLTEEQKHA ATGFFSVIKR RSEANLDASD HLASSTKKLP DSNSDLYSIP YSEIYRPFLK
401: KASEFLQKAG DLVSSPSLKK LLHSKAEAFL SNEYYESDIA WMDLDSKLDI TIGPYETYED EIFGYKATFE TFIGIRDDKA TADLKLFGDN LKLLEDNLPL
501: ESVYKSTDVS AAPIRVIQLI YNSGDVKGPQ TVAYNLPNDE KIVKDRGTSM VMLKNVQEAK FEHILKPIAE ITISKEQRGL VDFDSFFTHT ICHECCHGIG
601: PHTITLPGGQ TSTVRKELQE VHSAMEEAKA DIVGLWALKF LITKGLLSKS MVESMYVSFL AGCFRSIRFG LTEAHGKGQA LQFNYLYEKG AFVFHEDSTF
701: SVDFAKIEGA VESLSHEILT IQGKGDKNAA TLLLNKYCTI TGPLKTALEN LERVKVPVDI SPTFPLAEAL MN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)