AT3G24200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FAD/NAD(P)-binding oxidoreductase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: FAD binding, monooxygenase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; INVOLVED IN: oxidation reduction, ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 (InterPro:IPR010971), Monooxygenase, FAD-binding (InterPro:IPR002938), Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site (InterPro:IPR018168); Has 9026 Blast hits to 9022 proteins in 1487 species: Archae - 8; Bacteria - 6037; Metazoa - 152; Fungi - 512; Plants - 106; Viruses - 0; Other Eukaryotes - 2211 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8748095..8751575 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55073.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.07 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||
| Length | 505 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNRVLARNLR TSVCGTRILQ RTCSTVVTHD VSTSCSNESN ALNNSTDDGP QHDIAIVGGG MVGIALAASL ASKPLTKHLN VAIIDNNPLL GRRNIIEKGH 101: QPDPRVSTVT PATISFLKDI GAWKYIEQQR HAYFDKMQVW DYTGLGYTRY NANDVHQDVL GCVVENKVLQ SSQLSCVQES DLQKTVYPAR LNAMDMLPSS 201: SLTGLGEVPS TTDLFMRGRL AKLELSDGNR VYAKLVVGAD GSKSRVRELA GIKTTGWNYS QNAIICTVEH TAENYTAWQR FLPNGPIALL PIGDKFSNIV 301: WTMDPKEASD RKLMNEDDFI KAVNDALDSG YGPNPETTSS RDSLSWLTGD ATISAKERFE TPPKVVKLSS ERMMFPLSLR HAKDYVSKRV ALVGDSAHTV 401: HPLAGQGVNL GFADACALSK AIAEGIALGT DIGEANLLKR YEAERKPANI AMMAVLDGIQ KMYSLDFGPL NALRAAAFHG AHYISPLKKR IISYASGEQS 501: LPLFS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)