AT4G29490.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Metallopeptidase M24 family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Metallopeptidase M24 family protein; FUNCTIONS IN: manganese ion binding, aminopeptidase activity; INVOLVED IN: cellular process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT1G09300.1); Has 11688 Blast hits to 11680 proteins in 2580 species: Archae - 275; Bacteria - 8182; Metazoa - 386; Fungi - 373; Plants - 96; Viruses - 0; Other Eukaryotes - 2376 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:14487943..14491321 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54404.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.17 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||
| Length | 486 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSLSPPPIP MELHAGNRKK LLESIRRQLS SSNRSLDGFV LLQGGEEKNR YCTDHTELFR QESYFAYLFG VREPDFYGAI DIGSGKSILF IPRLPDDYAV 101: WLGEIKPLSH FKETYMVDMV FYVDEIIQVF NEQFKGSGKP LLYLLHGLNT DSSNFSKPAS FEGIDKFETD LTTLHPILAE CRVIKSSLEL QLIQFANDIS 201: SEAHIEVMRK VTPGMKEYQM ESMFLHHSYM YGGCRHCSYT CICATGDNSA VLHYGHAAAP NDRTFEDGDL ALLDMGAEYH FYGSDITCSF PVNGKFTSDQ 301: SLIYNAVLDA HNSVISAMKP GVNWVDMHKL AEKIILESLK KGSILTGDVD DMMVQRLGAV FMPHGLGHFM GIDTHDTGGY PKGVERPKKP GLKSLRTARD 401: LLEGMVITVE PGCYFIKALL FPAMANATTS KFFNRETIER FRNFGGVRIE SDLVVTANGC KNMTNVPRET WEIEAVMAGG PWPPTK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)