AT3G53970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.977 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : proteasome inhibitor-related | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
proteasome inhibitor-related; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome Inhibitor PI31 (InterPro:IPR021625), PI31 proteasome regulator (InterPro:IPR013886); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48530.1); Has 3872 Blast hits to 2739 proteins in 261 species: Archae - 2; Bacteria - 242; Metazoa - 2901; Fungi - 341; Plants - 91; Viruses - 17; Other Eukaryotes - 278 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19985208..19987132 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32118.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.73 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||||||||||
| Length | 302 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANSQTVMAM IRLARPPFRN NHDKVAFAIH SSFVASGYIL TATGRPAFAD EALSSSSQND VGIEGWNEFE GEYAFVYANP KKGSKKILVK CLAMDDKLLV 101: DAIADGGAEP AHLEIKVGDY AEESNEGDYS AQFKNLDKLV TDLQSEIIDK LDGKPKPVAS RAQSSSETNE EPRYYDDTPN PLGPQIHPSG VVVPPIPGNG 201: GYSDLFPGPG AGMYPGRGGF GDGSMLVGPT DPRFFPFGDG SDRPGFMGPP HPGMPPPGAR FDPYGPPGVP GFEPGRFTRQ PPRGPGGGHP DLEHFPGGSD 301: FI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)