AT2G38960.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 ASURE: endoplasmic reticulum What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : endoplasmic reticulum oxidoreductins 2 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
endoplasmic reticulum oxidoreductin | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
endoplasmic reticulum oxidoreductins 2 (ERO2); FUNCTIONS IN: FAD binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein thiol-disulfide exchange; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Endoplasmic reticulum oxidoreductin 1 (InterPro:IPR007266); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum oxidoreductins 1 (TAIR:AT1G72280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:16265455..16267883 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53451.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.40 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 472 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAETDVGSVK GKEKGSGKRW ILLIGAIAAV LLAVVVAVFL NTQNSSISEF TGKICNCRQA EQQKYIGIVE DCCCDYETVN RLNTEVLNPL LQDLVKTPFY 101: RYFKVKLWCD CPFWPDDGMC RLRDCSVCEC PESEFPEVFK KPLSQYNPVC QEGKPQATVD RTLDTRAFRG WTVTDNPWTS DDETDNDEMT YVNLRLNPER 201: YTGYIGPSAR RIWEAIYSEN CPKHTSEGSC QEEKILYKLV SGLHSSISVH IASDYLLDEA TNLWGQNLTL LYDRVLRYPD RVQNLYFTFL FVLRAVTKAE 301: DYLGEAEYET GNVIEDLKTK SLVKQVVSDP KTKAACPVPF DEAKLWKGQR GPELKQQLEK QFRNISAIMD CVGCEKCRLW GKLQILGLGT ALKILFTVNG 401: EDNLRHNLEL QRNEVIALMN LLHRLSESVK YVHDMSPAAE RIAGGHASSG NSFWQRIVTS IAQSKAVSGK RS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)