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AT1G10470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : response regulator 4
Curator
Summary (TAIR10)
Encodes a two-component response regulator. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.
Computational
Description (TAIR10)
response regulator 4 (ARR4); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT1G59940.1); Has 56806 Blast hits to 56102 proteins in 2778 species: Archae - 292; Bacteria - 49762; Metazoa - 41; Fungi - 583; Plants - 1526; Viruses - 7; Other Eukaryotes - 4595 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5641eggNOG:KOG1601EMBL:AK226322EMBL:BT024478
EnsemblPlants:AT1G10470EnsemblPlants:AT1G10470.1entrez:837587GeneID:837587
GO:GO:0000160GO:GO:0005622Gramene:AT1G10470.1hmmpanther:PTHR26402
hmmpanther:PTHR26402:SF526InterPro:IPR001789InterPro:IPR011006KEGG:ath:AT1G10470
KO:K14492OMA:KESTTFRPfam:O82798Pfam:PF00072
Pfscan:PS50110PROSITE:PS50110RefSeq:NP_172517.1SMART:SM00448
STRING:3702.AT1G10470.1SUPFAM:SSF52172TAIR:AT1G10470tair10-symbols:ARR4
tair10-symbols:ATRR1tair10-symbols:IBC7tair10-symbols:MEE7UniGene:At.22981
UniGene:At.67259UniProt:O82798UniProt:Q2HIV3
Coordinates (TAIR10) chr1:-:3442624..3443759
Molecular Weight (calculated) 28298.70 Da
IEP (calculated) 4.52
GRAVY (calculated) -0.29
Length 259 amino acids
Sequence (TAIR10)
(BLAST)
001: MARDGGVSCL RRSEMMSVGG IGGIESAPLD LDEVHVLAVD DSLVDRIVIE RLLRITSCKV TAVDSGWRAL EFLGLDNEKA SAEFDRLKVD LIITDYCMPG
101: MTGYELLKKI KESSNFREVP VVIMSSENVL TRIDRCLEEG AQDFLLKPVK LADVKRLRSH LTKDVKLSNG NKRKLPEDSS SVNSSLPPPS PPLTISPESS
201: PPLTVSTESS DSSPPLSPVE IFSTSPLSSP IDDEDDDVLT SSSEESPIRR QKMRSPGLD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)