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AT1G59940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : response regulator 3
Curator
Summary (TAIR10)
Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.
Computational
Description (TAIR10)
response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5641eggNOG:KOG1601EMBL:AK228970EMBL:BT024848
EnsemblPlants:AT1G59940EnsemblPlants:AT1G59940.1entrez:842288GeneID:842288
GO:GO:0000160GO:GO:0005622Gramene:AT1G59940.1hmmpanther:PTHR26402
hmmpanther:PTHR26402:SF526InterPro:IPR001789InterPro:IPR011006KEGG:ath:AT1G59940
KO:K14492OMA:RSEMIGIPfam:PF00072Pfam:Q9ZWS9
Pfscan:PS50110PROSITE:PS50110RefSeq:NP_176202.1SMART:SM00448
STRING:3702.AT1G59940.1SUPFAM:SSF52172TAIR:AT1G59940tair10-symbols:ARR3
UniGene:At.237UniProt:Q29PQ8UniProt:Q9ZWS9
Coordinates (TAIR10) chr1:-:22065894..22066895
Molecular Weight (calculated) 25251.40 Da
IEP (calculated) 4.42
GRAVY (calculated) -0.15
Length 231 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)