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AT2G42850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.604
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 718
Curator
Summary (TAIR10)
member of CYP718
Computational
Description (TAIR10)
cytochrome P450, family 718 (CYP718); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 716, subfamily A, polypeptide 1 (TAIR:AT5G36110.1); Has 34767 Blast hits to 34691 proteins in 1811 species: Archae - 71; Bacteria - 7179; Metazoa - 11081; Fungi - 6228; Plants - 8366; Viruses - 3; Other Eukaryotes - 1839 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G42850-MONOMEReggNOG:COG2124eggNOG:KOG0157EMBL:AC006931
EMBL:BT026377EMBL:CP002685EnsemblPlants:AT2G42850EnsemblPlants:AT2G42850.1
entrez:818885Gene3D:1.10.630.10GeneID:818885GO:GO:0004497
GO:GO:0005506GO:GO:0007275GO:GO:0010268GO:GO:0016021
GO:GO:0016125GO:GO:0016132GO:GO:0016705GO:GO:0020037
Gramene:AT2G42850.1hmmpanther:PTHR24286hmmpanther:PTHR24286:SF43HOGENOM:HOG000237613
InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT2G42850
OMA:PWIGETMPfam:PF00067PhylomeDB:Q9SJH2PIR:A84859
PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086Proteomes:UP000006548
Reactome:R-ATH-211916Reactome:R-ATH-5365859RefSeq:NP_181813.1scanprosite:PS00086
SMR:Q9SJH2STRING:3702.AT2G42850.1SUPFAM:SSF48264TAIR:AT2G42850
tair10-symbols:CYP718TMHMM:TMhelixUniGene:At.50132UniProt:Q9SJH2
Coordinates (TAIR10) chr2:+:17831662..17833309
Molecular Weight (calculated) 55408.00 Da
IEP (calculated) 9.41
GRAVY (calculated) -0.06
Length 485 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLEPNFVLS WVFLCIAATI SSTLFFFRKK HHRFITKKIQ KKKKLLPGEM GLPWIGETMD FYKAQKSNRV FEDFVNPRII KHGNIFKTRI MGSPTIVVNG
101: AEANRLILSN EFSLVVSSWP SSSVQLMGMN CIMAKQGEKH RVLRGIVANS LSYIGLESLI PKLCDTVKFH HETEWRGKEE ISLYRSAKVL TFTVVFECLY
201: GIKVEIGMLE VFERVLEGVF ALPVEFPCSK FARAKKARLE IETFLVGKVR EKRREMEKEG AEKPNTTLFS RLVEELIKGV ITEEEVVDNM VLLVFAAHDT
301: TSYAMSMTFK MLAQHPTCRD TLLQEHAQIK ANKGEGEYLT VEDVKKMKYS WQVVRETMRL SPPIFGSFRK AVADIDYGGY TIPKGWKILW TTYGTHYNPE
401: IFQDPMSFDP TRFDKPIQAY TYLPFGGGPR LCAGHQLAKI SILVFMHFVV TGFDWSLVYP DETISMDPLP FPSLGMPIKI SPKVS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)