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AT2G32270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : zinc transporter 3 precursor
Curator
Summary (TAIR10)
A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. also response to iron deficiency.
Computational
Description (TAIR10)
zinc transporter 3 precursor (ZIP3); FUNCTIONS IN: zinc ion transmembrane transporter activity; INVOLVED IN: zinc ion transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 5 precursor (TAIR:AT1G05300.1); Has 2134 Blast hits to 1919 proteins in 341 species: Archae - 2; Bacteria - 237; Metazoa - 455; Fungi - 672; Plants - 540; Viruses - 0; Other Eukaryotes - 228 (source: NCBI BLink).
Protein Annotations
eggNOG:KOG1558EnsemblPlants:AT2G32270EnsemblPlants:AT2G32270.1entrez:817787
Genevisible:Q9SLG3GO:GO:0005886Gramene:AT2G32270.1hmmpanther:PTHR11040
hmmpanther:PTHR11040:SF59InParanoid:Q9SLG3InterPro:IPR004698OMA:TSEAWEF
Pfam:PF02535Pfam:Q9SLG3PhylomeDB:Q9SLG3PIR:A84731
PIR:T52185PRIDE:Q9SLG3PRO:PR:Q9SLG3Proteomes:UP000006548
RefSeq:NP_180786.1STRING:3702.AT2G32270.1TAIR:AT2G32270tair10-symbols:ZIP3
TIGRfam:TIGR00820TIGRFAMs:TIGR00820TMHMM:TMhelixUniGene:At.10705
UniProt:Q9SLG3
Coordinates (TAIR10) chr2:+:13704278..13706612
Molecular Weight (calculated) 36045.50 Da
IEP (calculated) 7.26
GRAVY (calculated) 0.63
Length 339 amino acids
Sequence (TAIR10)
(BLAST)
001: MKTKNVKLLF FFFSVSLLLI AVVNAAEGHS HGGPKCECSH EDDHENKAGA RKYKIAAIPT VLIAGIIGVL FPLLGKVFPS LRPETCFFFV TKAFAAGVIL
101: ATGFMHVLPE AYEMLNSPCL TSEAWEFPFT GFIAMIAAIL TLSVDTFATS SFYKSHCKAS KRVSDGETGE SSVDSEKVQI LRTRVIAQVL ELGIIVHSVV
201: IGISLGASQS PDAAKALFIA LMFHQCFEGL GLGGCIAQGK FKCLSVTIMS TFFAITTPIG IVVGMGIANS YDESSPTALI VQGVLNAASA GILIYMSLVD
301: LLAADFTHPK MQSNTGLQIM AHIALLLGAG LMSLLAKWA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)