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AT1G13420.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.372
nucleus 0.309
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sulfotransferase 4B
Curator
Summary (TAIR10)
Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4B is expressed in the roots and transcript levels rise in response to cytokinin treatment.
Computational
Description (TAIR10)
sulfotransferase 4B (ST4B); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 4A (TAIR:AT2G14920.1); Has 2771 Blast hits to 2728 proteins in 191 species: Archae - 0; Bacteria - 215; Metazoa - 1679; Fungi - 1; Plants - 543; Viruses - 0; Other Eukaryotes - 333 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G13420-MONOMEREC:2.8.2.-eggNOG:ENOG4111H56eggNOG:KOG1584
EMBL:AC011810EMBL:BT030329EMBL:CP002684EnsemblPlants:AT1G13420
EnsemblPlants:AT1G13420.1entrez:837902Gene3D:3.40.50.300GeneID:837902
Genevisible:Q9FX56GO:GO:0005737GO:GO:0008146GO:GO:0009735
Gramene:AT1G13420.1hmmpanther:PTHR11783hmmpanther:PTHR11783:SF74InParanoid:Q9FX56
InterPro:IPR000863InterPro:IPR027417iPTMnet:Q9FX56KEGG:ath:AT1G13420
ncoils:CoilOMA:LWCFENSPaxDb:Q9FX56Pfam:PF00685
Pfam:Q9FX56PhylomeDB:Q9FX56PRIDE:Q9FX56PRO:PR:Q9FX56
ProteinModelPortal:Q9FX56Proteomes:UP000006548Reactome:R-ATH-156584RefSeq:NP_172799.1
SMR:Q9FX56STRING:3702.AT1G13420.1SUPFAM:SSF52540TAIR:AT1G13420
tair10-symbols:ATST4Btair10-symbols:ST4BUniGene:At.42031UniGene:At.72005
UniProt:Q9FX56
Coordinates (TAIR10) chr1:+:4604871..4605866
Molecular Weight (calculated) 37710.90 Da
IEP (calculated) 4.79
GRAVY (calculated) -0.46
Length 331 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEKDIPRNL KEEEEEEEEN QSEETKSLIS SLPSDIDCSG TKLYKYQGCW YDKDILQAIL NFNKNFQPQE TDIIVASFPK SGTTWLKALT FALAQRSKHT
101: SDNHPLLTHN PHELVPYLEL DLYLKSSKPD LTKLPSSSPR LFSTHMSFDA LKVPLKESPC KIVYVCRNVK DVLVSLWCFE NSMSGENNLS LEALFESLCS
201: GVNLCGPLWE NVLGYWRGSL EDPKHVLFLR YEELKTEPRV QIKRLAEFLD CPFTKEEEDS GGVDKILELC SLRNLSGLEI NKTGSLSEGV SFKSFFRKGE
301: VGDWKSYMTP EMENKIDMIV EEKLQGSGLK L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)