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AT4G11210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance-responsive (dirigent-like protein) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, petal, hypocotyl, cauline leaf, root; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G11190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
DNASU:826723eggNOG:ENOG410JTUKeggNOG:ENOG41107HWEMBL:AL049876
EMBL:AL161531EMBL:BT015626EMBL:CP002687EnsemblPlants:AT4G11210
EnsemblPlants:AT4G11210.1entrez:826723GeneID:826723Genevisible:Q9T019
GO:GO:0048046Gramene:AT4G11210.1hmmpanther:PTHR21495hmmpanther:PTHR21495:SF40
HOGENOM:HOG000242476InParanoid:Q9T019InterPro:IPR004265KEGG:ath:AT4G11210
OMA:FTIMGENPaxDb:Q9T019Pfam:PF03018Pfam:Q9T019
PhylomeDB:Q9T019PIR:T08200PRIDE:Q9T019PRO:PR:Q9T019
ProteinModelPortal:Q9T019Proteomes:UP000006548RefSeq:NP_192860.1SMR:Q9T019
STRING:3702.AT4G11210.1TAIR:AT4G11210UniGene:At.33580UniProt:Q9T019
Coordinates (TAIR10) chr4:+:6832691..6833245
Molecular Weight (calculated) 20574.80 Da
IEP (calculated) 6.77
GRAVY (calculated) 0.09
Length 184 amino acids
Sequence (TAIR10)
(BLAST)
001: MANQIYLFSL ICLSVLLCQS YTVSSFQKSL DLAKPCKRFV LHLHDIAYDG DNAANATSAA IVNPLGLGDF SFGKFVIMDD PVTMDQNYLS KPVARVQGFF
101: CYHGKATYDA WIAWTVVFNS TQHKGAFTIM GENPFMEPTR DLPIVGGTGD FIMTRGIATL TTDHIDGSKY FRVKLDIKLY ECYH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)