AT1G13430.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.964 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : sulfotransferase 4C | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4C is expressed in the roots and transcript levels rise in response to cytokinin treatment. | ||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
sulfotransferase 4C (ST4C); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 4A (TAIR:AT2G14920.1); Has 2670 Blast hits to 2627 proteins in 170 species: Archae - 0; Bacteria - 153; Metazoa - 1667; Fungi - 1; Plants - 539; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:4606530..4607585 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 40669.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.46 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 351 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDEKDILRNL REEEEEEEEN QSEETKILIS SLPWEIDYLG NKLFKYQGYW YYEDVLQSIP NIHSSFQPQE TDIVVASFYK SGTTWLKALT FALVQRSKHS 101: LEDHHHPLLS HNPHEIVPYL ELDLYLNSSK PDLTKFLSSS SSSSSPRLFS THMSLDALKL PLKKSPCKVV YVCRNVKDVL VSLWCFLNAN KGVEWGDFSQ 201: NEKIIRAENY SFKAIFESFC NGVTLHGPFW DHAQSYWRGS LEDPKHFLFM RYEELKAEPR TQVKRLAEFL DCPFTKEEED SGTVDKILEL CSLSNLSSLE 301: INKTGSLGGV DYKTYFRKGQ VGDWKSYMTS EMVNKIDMIV EEKLKGSGLK F |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)