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AT1G13430.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.964
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sulfotransferase 4C
Curator
Summary (TAIR10)
Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4C is expressed in the roots and transcript levels rise in response to cytokinin treatment.
Computational
Description (TAIR10)
sulfotransferase 4C (ST4C); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: sulfotransferase 4A (TAIR:AT2G14920.1); Has 2670 Blast hits to 2627 proteins in 170 species: Archae - 0; Bacteria - 153; Metazoa - 1667; Fungi - 1; Plants - 539; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G13430-MONOMERBioGrid:23143EC:2.8.2.-eggNOG:ENOG4111H56
eggNOG:KOG1584EMBL:AC011810EMBL:AK118984EMBL:BT006116
EMBL:CP002684EnsemblPlants:AT1G13430EnsemblPlants:AT1G13430.1entrez:837903
Gene3D:3.40.50.300GeneID:837903Genevisible:Q9FX55GO:GO:0005737
GO:GO:0008146GO:GO:0009735Gramene:AT1G13430.1hmmpanther:PTHR11783
hmmpanther:PTHR11783:SF74HOGENOM:HOG000037210InParanoid:Q9FX55InterPro:IPR000863
InterPro:IPR027417KEGG:ath:AT1G13430ncoils:CoilOMA:ANKGVEW
PaxDb:Q9FX55Pfam:PF00685Pfam:Q9FX55PhylomeDB:Q9FX55
PRIDE:Q9FX55PRO:PR:Q9FX55ProteinModelPortal:Q9FX55Proteomes:UP000006548
Reactome:R-ATH-156584RefSeq:NP_172800.2SMR:Q9FX55STRING:3702.AT1G13430.1
SUPFAM:SSF52540TAIR:AT1G13430tair10-symbols:ATST4Ctair10-symbols:ST4C
UniGene:At.42030UniGene:At.72005UniProt:Q9FX55
Coordinates (TAIR10) chr1:+:4606530..4607585
Molecular Weight (calculated) 40669.10 Da
IEP (calculated) 5.46
GRAVY (calculated) -0.49
Length 351 amino acids
Sequence (TAIR10)
(BLAST)
001: MDEKDILRNL REEEEEEEEN QSEETKILIS SLPWEIDYLG NKLFKYQGYW YYEDVLQSIP NIHSSFQPQE TDIVVASFYK SGTTWLKALT FALVQRSKHS
101: LEDHHHPLLS HNPHEIVPYL ELDLYLNSSK PDLTKFLSSS SSSSSPRLFS THMSLDALKL PLKKSPCKVV YVCRNVKDVL VSLWCFLNAN KGVEWGDFSQ
201: NEKIIRAENY SFKAIFESFC NGVTLHGPFW DHAQSYWRGS LEDPKHFLFM RYEELKAEPR TQVKRLAEFL DCPFTKEEED SGTVDKILEL CSLSNLSSLE
301: INKTGSLGGV DYKTYFRKGQ VGDWKSYMTS EMVNKIDMIV EEKLKGSGLK F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)