AT2G20630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : PP2C induced by AVRRPM1 | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
PP2C induced by AVRRPM1 (PIA1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G28400.1); Has 7689 Blast hits to 7674 proteins in 924 species: Archae - 12; Bacteria - 1445; Metazoa - 1454; Fungi - 791; Plants - 2662; Viruses - 11; Other Eukaryotes - 1314 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:8897826..8899648 | ||||||||
| Molecular Weight (calculated) | 30498.20 Da | ||||||||
| IEP (calculated) | 6.05 | ||||||||
| GRAVY (calculated) | -0.29 | ||||||||
| Length | 279 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGREILHKM KVGLCGSDTG RGKTKVWKNI AHGYDFVKGK AGHPMEDYVV SEFKKVDGHD LGLFAIFDGH LGHDVAKYLQ TNLFDNILKE KDFWTDTKNA 101: IRNAYISTDA VILEQSLKLG KGGSTAVTGI LIDGKTLVIA NVGDSRAVMS KNGVASQLSV DHEPSKEQKE IESRGGFVSN IPGDVPRVDG QLAVARAFGD 201: KSLKIHLSSD PDIRDENIDH ETEFILFASD GVWKVMSNQE AVDLIKSIKD PQAAAKELIE EAVSKQSTDD ISCIVVRFQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)