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AT2G20630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31541795 (2020): plasma membrane
  • PMID:31186290 (2019): cytosol None
  • PMID:30962257 (2019): plastid
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:22215637 (2012): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : PP2C induced by AVRRPM1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PP2C induced by AVRRPM1 (PIA1); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G28400.1); Has 7689 Blast hits to 7674 proteins in 924 species: Archae - 12; Bacteria - 1445; Metazoa - 1454; Fungi - 791; Plants - 2662; Viruses - 11; Other Eukaryotes - 1314 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT2G20630EnsemblPlants:AT2G20630.1entrez:816590hmmpanther:PTHR13832
hmmpanther:PTHR13832:SF372Pfam:PF00481Pfscan:PS51746tair10-symbols:PIA1
Coordinates (TAIR10) chr2:-:8897826..8899648
Molecular Weight (calculated) 30498.20 Da
IEP (calculated) 6.05
GRAVY (calculated) -0.29
Length 279 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGREILHKM KVGLCGSDTG RGKTKVWKNI AHGYDFVKGK AGHPMEDYVV SEFKKVDGHD LGLFAIFDGH LGHDVAKYLQ TNLFDNILKE KDFWTDTKNA
101: IRNAYISTDA VILEQSLKLG KGGSTAVTGI LIDGKTLVIA NVGDSRAVMS KNGVASQLSV DHEPSKEQKE IESRGGFVSN IPGDVPRVDG QLAVARAFGD
201: KSLKIHLSSD PDIRDENIDH ETEFILFASD GVWKVMSNQE AVDLIKSIKD PQAAAKELIE EAVSKQSTDD ISCIVVRFQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)