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AT3G29350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : histidine-containing phosphotransmitter 2
Curator
Summary (TAIR10)
Encodes AHP2, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function in His-to-Asp phosphorelay signal transduction and as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).
Computational
Description (TAIR10)
histidine-containing phosphotransmitter 2 (AHP2); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 3 (TAIR:AT5G39340.1); Has 369 Blast hits to 368 proteins in 74 species: Archae - 2; Bacteria - 69; Metazoa - 0; Fungi - 28; Plants - 267; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
BioGrid:7922DNASU:822593eggNOG:COG2198eggNOG:KOG4747
EMBL:AB012568EMBL:AB015142EMBL:AP001309EMBL:AY064148
EMBL:AY097403EMBL:CP002686EnsemblPlants:AT3G29350EnsemblPlants:AT3G29350.1
entrez:822593Gene3D:1.20.120.160GeneID:822593Genevisible:Q9ZNV8
GO:GO:0000160GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0009736GO:GO:0009927GO:GO:0016310GO:GO:0043424
hmmpanther:PTHR28242hmmpanther:PTHR28242:SF9HOGENOM:HOG000272680InParanoid:Q9ZNV8
IntAct:Q9ZNV8InterPro:IPR008207KEGG:ath:AT3G29350KO:K14490
OMA:VDIEYKAPaxDb:Q9ZNV8PDB:4PACPDBsum:4PAC
Pfam:PF01627Pfam:Q9ZNV8Pfscan:PS50894PhylomeDB:Q9ZNV8
PRIDE:Q9ZNV8PRO:PR:Q9ZNV8PROSITE:PS50894ProteinModelPortal:Q9ZNV8
Proteomes:UP000006548RefSeq:NP_189581.1RefSeq:NP_850649.1SMR:Q9ZNV8
STRING:3702.AT3G29350.1SUPFAM:SSF47226TAIR:AT3G29350tair10-symbols:AHP2
UniGene:At.22337UniProt:Q9ZNV8
Coordinates (TAIR10) chr3:-:11264379..11265408
Molecular Weight (calculated) 17476.90 Da
IEP (calculated) 4.77
GRAVY (calculated) -0.16
Length 156 amino acids
Sequence (TAIR10)
(BLAST)
001: MDALIAQLQR QFRDYTISLY QQGFLDDQFT ELKKLQDDGS PDFVSEVLSL FFEDCVKLIS NMARALDTTG TVDFSQVGAS VHQLKGSSSS VGAKRVKTLC
101: VSFKECCEAK NYEGCVRCLQ QVDIEYKALK TKLQDMFNLE KQIIQAGGIV PQVDIN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)