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AT2G17820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : histidine kinase 1
Curator
Summary (TAIR10)
Encodes a member of the histidine kinase family.
Computational
Description (TAIR10)
histidine kinase 1 (HK1); FUNCTIONS IN: osmosensor activity, protein histidine kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: response to water deprivation, seed maturation, response to osmotic stress; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase (TAIR:AT2G47430.1); Has 149976 Blast hits to 132540 proteins in 3044 species: Archae - 792; Bacteria - 133304; Metazoa - 35; Fungi - 2288; Plants - 2106; Viruses - 27; Other Eukaryotes - 11424 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G17820-MONOMERBioGrid:1648EC:2.7.13.3eggNOG:ENOG410IRDA
eggNOG:ENOG410XT1KEMBL:AB010914EMBL:CP002685EnsemblPlants:AT2G17820
EnsemblPlants:AT2G17820.1entrez:816291Gene3D:1.10.287.130Gene3D:3.30.565.10
GeneID:816291Genevisible:Q9SXL4GO:GO:0000155GO:GO:0005034
GO:GO:0005783GO:GO:0005886GO:GO:0006970GO:GO:0009414
GO:GO:0009738GO:GO:0009927GO:GO:0010105GO:GO:0010375
GO:GO:0010431GO:GO:0016021Gramene:AT2G17820.1hmmpanther:PTHR24423
hmmpanther:PTHR24423:SF436HOGENOM:HOG000029544InParanoid:Q9SXL4IntAct:Q9SXL4
InterPro:IPR001789InterPro:IPR003594InterPro:IPR003661InterPro:IPR004358
InterPro:IPR005467InterPro:IPR011006KEGG:ath:AT2G17820OMA:WHFTRIY
PaxDb:Q9SXL4Pfam:PF00072Pfam:PF00512Pfam:PF02518
Pfam:Q9SXL4Pfscan:PS50109Pfscan:PS50110PIR:T08856
PIR:T52459PRIDE:Q9SXL4PRINTS:PR00344PRO:PR:Q9SXL4
PROSITE:PS50109PROSITE:PS50110ProteinModelPortal:Q9SXL4Proteomes:UP000006548
RefSeq:NP_565424.1SMART:SM00387SMART:SM00388SMART:SM00448
SMR:Q9SXL4STRING:3702.AT2G17820.1SUPFAM:SSF47384SUPFAM:SSF52172
SUPFAM:SSF55874TAIR:AT2G17820tair10-symbols:AHK1tair10-symbols:ATHK1
tair10-symbols:HK1TMHMM:TMhelixUniGene:At.5429UniProt:Q9SXL4
Coordinates (TAIR10) chr2:-:7743133..7748013
Molecular Weight (calculated) 135457.00 Da
IEP (calculated) 6.75
GRAVY (calculated) -0.23
Length 1207 amino acids
Sequence (TAIR10)
(BLAST)
0001: MRGDSFSMSI ENLPDSPMGS RKKKMQIRKV FDKMTEWVTP WRSNLESPRE MMILRGDVEQ DEFQYASSHC LSSYYSVFVV RLAIMVMLAI LIGLLTVLTW
0101: HFTRIYTKQS LQTLAYGLRY ELLQRPVLRM WSVLNTTSEL TTAQVKLSEY VIKKYDKPTT QEELVEMYQA MKDVTWALFA SAKALNAITI NYRNGFVQAF
0201: HRDPASSSTF YIFSDLKNYS ISGTGPEDVS GWNNKSIHGN MSAIWYQQQL DPVTGENLGK PLKIPPDDLI NIAGISQVPD GEASWHVTVS KYMDSPLLSA
0301: ALPVFDASNK SIVAVVGVTT ALYSVGQLMR DLVEVHGGHI YLTSQEGYLL ATSTDGPLLK NTSNGPQLMK ATDSEEWVIK SGAQWLEKTY GSKRPHVVHA
0401: ENVKLGDQRY YIDSFYLNLK RLPIVGVVII PRKFIMGKVD ERAFKTLIIL ISASVCIFFI GCVCILILTN GVSKEMKLRA ELIRQLDARR RAEASSNYKS
0501: QFLANMSHEL RTPMAAVIGL LDILISDDCL SNEQYATVTQ IRKCSTALLR LLNNILDLSK VESGKLVLEE AEFDLGRELE GLVDMFSVQC INHNVETVLD
0601: LSDDMPALVR GDSARLVQIF ANLISNSIKF TTTGHIILRG WCENINSLHD EMSVSVDRRK PWAPMKTKQV QHRNHLQKSC KNANKMVLWF EVDDTGCGID
0701: PSKWDSVFES FEQADPSTTR THGGTGLGLC IVRNLVNKMG GEIKVVQKNG LGTLMRLYLI LSTPDTVDQN IQPDFSKYGL VVMLSMYGST ARMITSKWLR
0801: KHGIATVEAS DWNELTQIIR DLLETGSRDN SFDSQHNISD PLRAELSNIV EIKNPVFVIV VDIGVLDLTT NIWKEQLNYL DRFSNKAKFA WLLKHDTSNT
0901: VKTELRRKGH VMMVNKPLYK AKMIQILEAV IKNRKRGLCN DLRNRGNGSD ESHDCLEIDP TQFDTCSSDD SSETSGEKQV DKSVKPSTLH SPVLKNYLID
1001: ATTSNDDSTS ASMTQKNPEE EDWKDRLYSG IALDGKNQKS LEGIRILLAE DTPVLQRVAT IMLEKMGATV TAVWDGQQAV DSLNYKSINA QAPTEEHKSF
1101: EEETANKVTT RETSLRNSSP YDLILMDCQM PKMDGYEATK AIRRAEIGTE LHIPIVALTA HAMSSDEAKC LEVGMDAYLT KPIDRKLMVS TILSLTKPSA
1201: FQTSLSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)