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AT3G63110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.500
plastid 0.500
ASURE: nucleus,plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : isopentenyltransferase 3
Curator
Summary (TAIR10)
Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.
Computational
Description (TAIR10)
isopentenyltransferase 3 (IPT3); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G63110-MONOMERBioCyc:MetaCyc:AT3G63110-MONOMERBRENDA:2.5.1.112EC:2.5.1.112
eggNOG:COG0324eggNOG:KOG1384EMBL:AB061401EMBL:AB062610
EMBL:AL163816EMBL:AY125508EMBL:BT001075EMBL:CP002686
EnsemblPlants:AT3G63110EnsemblPlants:AT3G63110.1entrez:825486Gene3D:3.40.50.300
GeneID:825486Genevisible:Q93WC9GO:GO:0005524GO:GO:0005634
GO:GO:0005739GO:GO:0006400GO:GO:0009507GO:GO:0009536
GO:GO:0009691GO:GO:0009824GO:GO:0031965GO:GO:0052381
GO:GO:0052622GO:GO:0052623Gramene:AT3G63110.1gramene_pathway:2.5.1.-
gramene_pathway:2.5.1.27gramene_pathway:PWY-2681hmmpanther:PTHR11088hmmpanther:PTHR11088:SF30
HOGENOM:HOG000238182InParanoid:Q93WC9InterPro:IPR018022InterPro:IPR027417
iPTMnet:Q93WC9KEGG:00908+2.5.1.75KEGG:ath:AT3G63110KO:K10760
OMA:MAMCKQPPaxDb:Q93WC9Pfam:PF01715Pfam:Q93WC9
PhylomeDB:Q93WC9PIR:T48100PRIDE:Q93WC9PRO:PR:Q93WC9
ProteinModelPortal:Q93WC9Proteomes:UP000006548RefSeq:NP_567138.1SMR:Q93WC9
STRING:3702.AT3G63110.1SUPFAM:SSF52540TAIR:AT3G63110tair10-symbols:ATIPT3
tair10-symbols:IPT3UniGene:At.10553UniProt:Q93WC9
Coordinates (TAIR10) chr3:-:23318437..23319447
Molecular Weight (calculated) 37916.90 Da
IEP (calculated) 8.28
GRAVY (calculated) -0.21
Length 336 amino acids
Sequence (TAIR10)
(BLAST)
001: MIMKISMAMC KQPLPPSPTL DFPPARFGPN MLTLNPYGPK DKVVVIMGAT GTGKSRLSVD IATRFRAEII NSDKIQVHQG LDIVTNKITS EESCGVPHHL
101: LGVLPPEADL TAANYCHMAN LSIESVLNRG KLPIIVGGSN SYVEALVDDK ENKFRSRYDC CFLWVDVALP VLHGFVSERV DKMVESGMVE EVREFFDFSN
201: SDYSRGIKKA IGFPEFDRFF RNEQFLNVED REELLSKVLE EIKRNTFELA CRQREKIERL RKVKKWSIQR VDATPVFTKR RSKMDANVAW ERLVAGPSTD
301: TVSRFLLDIA SRRPLVEAST AVAAAMEREL SRCLVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)