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AT3G57040.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : response regulator 9
Curator
Summary (TAIR10)
response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2
Computational
Description (TAIR10)
response regulator 9 (ARR9); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 3 (TAIR:AT2G41310.1); Has 31916 Blast hits to 31617 proteins in 2439 species: Archae - 203; Bacteria - 27463; Metazoa - 9; Fungi - 302; Plants - 1334; Viruses - 4; Other Eukaryotes - 2601 (source: NCBI BLink).
Protein Annotations
BioGrid:10187eggNOG:COG5641eggNOG:KOG1601EMBL:AB010918
EMBL:AL138655EMBL:AY090234EMBL:AY133571EMBL:CP002686
EnsemblPlants:AT3G57040EnsemblPlants:AT3G57040.1entrez:824871GeneID:824871
Genevisible:O80366GO:GO:0000156GO:GO:0000160GO:GO:0005634
GO:GO:0006351GO:GO:0006355GO:GO:0007623GO:GO:0009735
GO:GO:0009736Gramene:AT3G57040.1hmmpanther:PTHR26402hmmpanther:PTHR26402:SF507
HOGENOM:HOG000034820InParanoid:O80366IntAct:O80366InterPro:IPR001789
InterPro:IPR011006KEGG:ath:AT3G57040KO:K14492OMA:IEILPLQ
PaxDb:O80366Pfam:O80366Pfam:PF00072Pfscan:PS50110
PhylomeDB:O80366PIR:T47764PRIDE:O80366PRO:PR:O80366
PROSITE:PS50110ProteinModelPortal:O80366Proteomes:UP000006548RefSeq:NP_191263.1
SMART:SM00448SMR:O80366STRING:3702.AT3G57040.1SUPFAM:SSF52172
TAIR:AT3G57040tair10-symbols:ARR9tair10-symbols:ATRR4UniGene:At.245
UniProt:O80366
Coordinates (TAIR10) chr3:+:21110059..21111228
Molecular Weight (calculated) 26090.30 Da
IEP (calculated) 4.92
GRAVY (calculated) -0.33
Length 234 amino acids
Sequence (TAIR10)
(BLAST)
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)