AT1G32070.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nuclear shuttle interacting | ||||||||||||
| Curator Summary (TAIR10) |
Encodes a nuclear acetyltransferase (NSI)that interacts with the geminivirus movement protein NSP. This interaction is required for viral infection and systemic spread. Acetylates the viral coat protein (CP) in vitro, but not NSP. NSP inhibits NSI activity in vitro. NSI is highly transcribed in phloem and in xylem parenchyma cells, and in the apical meristem and guard cells, within young tissues in Arabidopsis, and its expression is turned off as tissues mature. | ||||||||||||
| Computational Description (TAIR10) |
nuclear shuttle interacting (NSI); FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: pathogenesis, metabolic process, spread of virus in host; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT1G26220.1); Has 2138 Blast hits to 2138 proteins in 615 species: Archae - 23; Bacteria - 1688; Metazoa - 2; Fungi - 19; Plants - 107; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:11534851..11536289 | ||||||||||||
| Molecular Weight (calculated) | 28563.80 Da | ||||||||||||
| IEP (calculated) | 4.71 | ||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||
| Length | 257 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLLIPISSSS SSSIPPPNSY PSNHHSLFFS NLTFPIQHGS RKLKTLRLRA NFWESIRSGF VKNNNSTQLV EPPSIVNDEE EETEPLLPVE FTLVERNLED 101: GLVEEIIFSS GGEIDVYDLQ GLCDKVGWPR RPLVKLAAAL KNSYMVATLH SVMKSSSDSD SSEGGDGEKQ QEKKLIGMAR ATSDHAFNAT IWDVLVDPEY 201: QGQGLGKALV EKLVRALLQR DIGNISLFAD SQVVDFYQNL GFEADPEGIK GMFWYPK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)