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AT1G67280.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21539947 (2011): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16923014 (2006): plastid plastid stroma
  • PMID:16648217 (2006): plastid
  • PMID:16207701 (2006): plastid
  • PMID:11719511 (2002): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein; FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cold, carbohydrate metabolic process; LOCATED IN: thylakoid, thylakoid lumen, stromule, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: glyoxalase I homolog (TAIR:AT1G11840.6); Has 8954 Blast hits to 5185 proteins in 1641 species: Archae - 131; Bacteria - 5795; Metazoa - 515; Fungi - 329; Plants - 252; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G67280-MONOMERBioCyc:ARA:GQT-891-MONOMEREC:4.4.1.5eggNOG:COG0346
eggNOG:KOG2943EMBL:AC002130EMBL:AF419551EMBL:AY079102
EMBL:AY085148EMBL:CP002684EnsemblPlants:AT1G67280EnsemblPlants:AT1G67280.1
entrez:843048Gene3D:3.10.180.10GeneID:843048Genevisible:Q8W593
GO:GO:0004462GO:GO:0009409GO:GO:0009507GO:GO:0009570
GO:GO:0009579GO:GO:0010319GO:GO:0031977GO:GO:0046872
gramene_pathway:4.4.1.5gramene_pathway:PWY-5386hmmpanther:PTHR10374hmmpanther:PTHR10374:SF12
HOGENOM:HOG000232011InParanoid:Q8W593InterPro:IPR004360InterPro:IPR004361
InterPro:IPR018146InterPro:IPR029068KEGG:00620+4.4.1.5KEGG:ath:AT1G67280
KO:K01759OMA:VNCLGVAPaxDb:Q8W593Pfam:PF00903
Pfam:Q8W593PhylomeDB:Q8W593PIR:E96696PRIDE:Q8W593
PRO:PR:Q8W593PROSITE:PS00934ProteinModelPortal:Q8W593Proteomes:UP000006548
RefSeq:NP_001077783.1RefSeq:NP_176896.1scanprosite:PS00934SMR:Q8W593
STRING:3702.AT1G67280.1SUPFAM:SSF54593TAIR:AT1G67280TIGRfam:TIGR00068
TIGRFAMs:TIGR00068UniGene:At.22738UniPathway:UPA00619UniProt:Q8W593
Coordinates (TAIR10) chr1:-:25188563..25190547
Molecular Weight (calculated) 39169.30 Da
IEP (calculated) 7.45
GRAVY (calculated) -0.27
Length 350 amino acids
Sequence (TAIR10)
(BLAST)
001: MVRIIPMAAS SIRPSLACFS DSPRFPISLL SRNLSRTLHV PQSQLFGLTS HKLLRRSVNC LGVAESGKAA QATTQDDLLT WVKNDKRRML HVVYRVGDMD
101: RTIKFYTECL GMKLLRKRDI PEEKYTNAFL GYGPEDSHFV IELTYNYGVD KYDIGAGFGH FGIAVDDVAK TVELVKAKGG KVSREPGPVK GGKTVIAFIE
201: DPDGYKFELL ERGPTPEPLC QVMLRVGDLD RAIKFYEKAF GMELLRTRDN PEYKYTIAMM GYGPEDKFPV LELTYNYGVT EYDKGNAYAQ IAIGTDDVYK
301: TAEAIKLFGG KITREPGPLP GISTKITACL DPDGWKSVFV DNIDFLKELE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)