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AT1G02210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 4 (TAIR:AT1G02230.1); Has 519 Blast hits to 519 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 519; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:839482EMBL:BT029354EMBL:CP002684EnsemblPlants:AT1G02210
EnsemblPlants:AT1G02210.1entrez:839482GeneID:839482GO:GO:0003677
GO:GO:0005634GO:GO:0006351GO:GO:0006355Gramene:AT1G02210.1
hmmpanther:PTHR31719hmmpanther:PTHR31719:SF40InterPro:IPR003441KEGG:ath:AT1G02210
Pfam:PF02365Pfscan:PS51005PhylomeDB:Q3E7L2PROSITE:PS51005
Proteomes:UP000006548RefSeq:NP_171724.1SMR:Q3E7L2SUPFAM:SSF101941
TAIR:AT1G02210UniGene:At.65873UniProt:Q3E7L2
Coordinates (TAIR10) chr1:-:427548..427811
Molecular Weight (calculated) 10247.20 Da
IEP (calculated) 4.95
GRAVY (calculated) -0.23
Length 87 amino acids
Sequence (TAIR10)
(BLAST)
1: MVWFFFSCDE YNEEILKTNS GYWKETVSNT PIIGKWITSN GVKIGEKQVL VFQSYENING SKSDWVMHVY QPTFLPPNQV IFRIYDV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)