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AT4G04910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28611809 (2017): cytosol
  • PMID:27936405 (2017): plasma membrane
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25641898 (2015): plasma membrane
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:22550958 (2012): plastid
  • PMID:22430844 (2012): Golgi
  • PMID:22318864 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : AAA-type ATPase family protein
Curator
Summary (TAIR10)
N-ethylmaleimide sensitive factor
Computational
Description (TAIR10)
N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G04910-MONOMERBioGrid:11141EC:3.6.4.6eggNOG:COG0464
eggNOG:KOG0741EMBL:AF128393EMBL:AL161502EMBL:AY102111
EMBL:CP002687EnsemblPlants:AT4G04910EnsemblPlants:AT4G04910.1entrez:825830
Gene3D:3.10.330.10Gene3D:3.40.50.300GeneID:825830Genevisible:Q9M0Y8
GO:GO:0005524GO:GO:0005773GO:GO:0005794GO:GO:0005795
GO:GO:0005886GO:GO:0006891GO:GO:0009506GO:GO:0016887
GO:GO:0043001GO:GO:0046872GO:GO:0048211Gramene:AT4G04910.1
hmmpanther:PTHR23078hmmpanther:PTHR23078:SF3HOGENOM:HOG000198544InParanoid:Q9M0Y8
IntAct:Q9M0Y8InterPro:IPR003338InterPro:IPR003593InterPro:IPR003959
InterPro:IPR003960InterPro:IPR004201InterPro:IPR009010InterPro:IPR027417
InterPro:IPR029067iPTMnet:Q9M0Y8KEGG:ath:AT4G04910KO:K06027
MINT:MINT-8061068OMA:NEDVDCKPaxDb:Q9M0Y8Pfam:PF00004
Pfam:PF02933Pfam:Q9M0Y8PhylomeDB:Q9M0Y8PIR:G85061
PRIDE:Q9M0Y8PRO:PR:Q9M0Y8PROSITE:PS00674ProteinModelPortal:Q9M0Y8
Proteomes:UP000006548Reactome:R-ATH-204005Reactome:R-ATH-6807878RefSeq:NP_192400.2
scanprosite:PS00674SMART:SM00382SMART:SM01073SMR:Q9M0Y8
STRING:3702.AT4G04910.1SUPFAM:SSF50692SUPFAM:SSF52540SUPFAM:SSF54585
TAIR:AT4G04910tair10-symbols:NSFUniGene:At.33942UniGene:At.67369
UniProt:Q9M0Y8
Coordinates (TAIR10) chr4:-:2489696..2495666
Molecular Weight (calculated) 81492.00 Da
IEP (calculated) 5.98
GRAVY (calculated) -0.12
Length 742 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGRYGSQVM TMTVTNTPSA DLAFTNLAYC SSSDLRQFSV PGSDLFLANV ADSFILSLCG HGSIRDGNIA LNAIQRRHAR VSTGDMVSVS RFVPPENFDL
101: AMLTLELEFV KKGTKSEQVD AALLSTQLKR KYTNQVLTVG QKATFEYHGT NYILTVNRAD VEGQDHTNGI ERGLLSKDTY IVFEASNASG IKIVNQREAA
201: SSNIFKHKEF NLESLGIGGL GAEFADIFRR AFASRVFPPH VTSRLGIKHV KGMLLFGPPG TGKTLMARQI GKMLNGKDPK IVNGPEVLSK FVGETEKNVR
301: DLFADAEQDQ RTLGDASELH VIIFDEIDAI CKSRGSTRDG TGVHDSIVNQ LLTKIDGVEA LNNVLLIGMT NRKDLLDEAL LRPGRLEVQV EISLPDEAGR
401: LQILQIHTNK MKENSFLGTD INLQELAART KNYSGAELEG VVKSATSYAL NRQLSMDDLT KPVEEENIKI TMEDFLHAIY EVQPAFGAST DDLERCRLNG
501: MVDCGHRHNH IYKRAMLLVE QVKVSTRSPL VTCLLEGPSG SGKTALAATI GIDSDFPYVK IVSAETMIGL SESTKCAHIV KVFEDAYKSP MSIIILDDIE
601: RLLEFIAIGP RFSNIISQTL MVLLKRLPPK GKKLLVFGTT SEVTFLESVG ISDCFSVTHS VPTLQKEDAK KVLNQLNLFS EDDVDSAAEA LNDMPIKKIY
701: MLIEMAAQGE NGGSAEAIYA GREKININHF YDCLGDFIRF TG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)