AT2G25670.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928 proteins in 1799 species: Archae - 86; Bacteria - 6347; Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses - 259; Other Eukaryotes - 13792 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10929062..10930619 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35130.10 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.85 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.45 | ||||||||||||||||||||||||||||
| Length | 318 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGGGNRRDE GSITIQSTNL FAALDTRKKK KKSDKAGKSK GSSKSREPEK EPEPQVYWAP TPLKVKSWAD IDDEDDDDDY YATTAPPQSG WSTSLPSHTD 101: SKDVHVEESE SEEDILDEGD DDVEEEQEQE TEVQVHPEPE VKKAPEVPAP PKEAERQLSK KERKKKELAE LEALLADFGV APKENNGLEE SQEAGQEKKE 201: DVNGEGEKKE NAAGGESKAS KKKKKKDKQK EVKESQEQQA NNNADAVDEA AGSEPTEEES PIDVKERIKK LASMKKKKSG KEVDAAAKAA AEEAAARRKK 301: LAAAKKKEKN HYNQQPVR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)