AT4G32610.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : copper ion binding | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
copper ion binding; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25670.2); Has 53099 Blast hits to 32361 proteins in 2088 species: Archae - 115; Bacteria - 8255; Metazoa - 19472; Fungi - 6714; Plants - 2333; Viruses - 365; Other Eukaryotes - 15845 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:15728376..15729897 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 34780.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.00 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.47 | ||||||||||||||||||||||||
| Length | 315 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVGGGNRRDE GSMPIQNTNL FAALDTSRKK KKSDKAGKSK ASSKREDSQK EPEPQVFWAP TPLKAKAWAD IDSDDEDDDY YATTAPPQSL WSTSEASHSD 101: AKDVPAEEIE SEEDTLDDGD DDDVEEDHEQ GTETQVHPEA EPEVKKAPEV RAPPKEAERQ LSKKERKKKE LAELEALLAD FGVATKDENG QQDSQDKGEK 201: KEVNDEGEKK ENTTGESKAS KKKKKKDKQK ELKESQSEVK SNSDAASESA EQEESSSSID VKERLKKIAS MKKKKSSKEV DGASTAAAKE AAARKAKLAA 301: AKKKEKKNYN QQPVR |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)