AT4G03180.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:1403289..1404663 | ||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 21693.90 Da | ||||||||||||||||||||||||||||||||
IEP (calculated) | 10.65 | ||||||||||||||||||||||||||||||||
GRAVY (calculated) | -1.53 | ||||||||||||||||||||||||||||||||
Length | 185 amino acids | ||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKKFYQNADH ETDKSKSAET KKRKNMRRLG GGGLSLQTFA NMKSENNRYN PSLIKKQKEF YKNAKYVSKF RKSLKQQNIP DKNETGETSK VGDDDDDDKR 101: KGKSNKRIGV EDLYKQTREE MERVRKEREA MFQAKKEAKE EAESRRKEAK GKMLRKTRHG QPVMKYRIEH LLESIKKSAG INEIA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)