AT3G24080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : KRR1 family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
KRR1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KRR1 interacting protein 1, subgroup (InterPro:IPR007851), KRR1 interacting protein 1 (InterPro:IPR018034); Has 58267 Blast hits to 33525 proteins in 1602 species: Archae - 251; Bacteria - 4220; Metazoa - 24830; Fungi - 6847; Plants - 2500; Viruses - 358; Other Eukaryotes - 19261 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8695191..8697107 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74963.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.45 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.49 | ||||||||||||||||||||||||||||
| Length | 638 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMGRPKAIPD DDDGELSQFK GFDVDNDFAK RLLHNKERED LQRYEEKNKQ GLFSESEEEP ETESEPDSDL GNPESNLKFV DLLIKVKKKD PIIKDKDAKF 101: YEYDDESSEE DEVDKKDTKK KKKKKKMYLK DVQAQHLLEG GPEFVEEDEE RKVRTYAEEQ KETRKAVTDA WKAEGNESGE DDDFLRVVEK EGDDDVEVDE 201: ELAKKMDEYY GDEAEATENQ FLKDYLVKQL WKEKEERVPG EEELKELSED DHEVWDQEDF EAGRPLDLLN YRHEDENAGD TVMGQSRVVE GSVRKKDNAR 301: KAQRKNKDER MKKEDDVRKE ELKRLKNVKK KEIKEKMKKV LSVAGFKDGE ECPLDAKDFD DEFDPEEYDK MMKAAFDDKY YGEEDSDLNS DEDDDGEKPD 401: FDKEDELLGL PKDWDVTKGG DVFAAAREKV LKHKENMLGI DEEEEEDEEE EEDEEEEEVD EEKEAEGKRK RKRKTSLVQK TKEALMEEYY KLDYEDTIGE 501: LRTRFKYAKV QPNRFELDTG EILTLDDAEL NQYVPLKKMA PYVEKDWEVN RHKVKEQKRK IRELWEGKHD EKKSKKRKKN DVVETKPTPK EAEAEAEAEA 601: EAEAEAEAEA KLSRKAKRRR RQAEKKLPPS RMAAYGKA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)