AT5G61970.1::SUBA5

AT5G61970.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
cytosol 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31615849 (2019): plastid plastid thylakoid PMID:30447334 (2019): plasma membrane PMID:28865150 (2017): extracellular region plant-type cell wall PMID:27122571 (2016): mitochondrion PMID:26781341 (2016): plasma membrane PMID:23673981 (2013): plastid plastid stroma plastoglobules PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane PMID:22550958 (2012): plastid PMID:21166475 (2011): cytosol PMID:19334764 (2009): plasma membrane	PMID:24556609 (2014): AT4G32150.1:None: PMID:24556609 (2014): AT5G20920.1:None: PMID:24556609 (2014): AT5G02960.1:None: PMID:24556609 (2014): AT1G76810.1:None: PMID:24556609 (2014): AT3G46520.1:None: PMID:24556609 (2014): AT3G05060.1:None: PMID:24556609 (2014): AT5G39510.1:None: PMID:24556609 (2014): AT3G25520.1:None: PMID:24556609 (2014): AT2G35880.1:None: PMID:24556609 (2014): AT3G56190.1:None: PMID:24556609 (2014): AT4G18060.1:None: PMID:24556609 (2014): AT3G23620.1:None: PMID:24556609 (2014): AT1G25260.1:None: PMID:24556609 (2014): AT4G28250.1:None: PMID:24556609 (2014): AT5G13850.1:None: PMID:24556609 (2014): AT2G21160.1:None: PMID:24556609 (2014): AT5G15200.1:None: PMID:24556609 (2014): AT4G26230.1:None: PMID:24556609 (2014): AT1G10590.1:None: PMID:24556609 (2014): AT2G23940.1:None: PMID:24556609 (2014): AT2G18020.1:None: PMID:24556609 (2014): AT3G49100.1:None: PMID:24556609 (2014): AT1G56110.1:None: PMID:24556609 (2014): AT5G54110.1:None: PMID:24556609 (2014): AT1G04170.1:None: PMID:24556609 (2014): AT5G11150.1:None: PMID:24556609 (2014): AT1G36240.1:None: PMID:24556609 (2014): AT3G15356.1:None: PMID:24556609 (2014): AT1G04750.1:None: PMID:24556609 (2014): AT2G25980.1:None: PMID:24556609 (2014): AT2G25670.1:None: PMID:24556609 (2014): AT5G22360.1:None: PMID:24556609 (2014): AT4G32760.1:None: PMID:24556609 (2014): AT1G02780.1:None: PMID:24556609 (2014): AT4G29520.1:None: PMID:24556609 (2014): AT5G06970.1:None: PMID:24556609 (2014): AT5G55660.1:None: PMID:24556609 (2014): AT4G24190.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT1G73430.1 golgi [7.69]
AT2G21390.1 golgi [7.67]
AT4G21150.1 endoplasmic reticulum [7.63]
AT1G76400.1 endoplasmic reticulum [7.45]
AT3G05420.1 cytosol [7.45]
AT4G31490.1 golgi [7.17]
AT1G70770.1 endoplasmic reticulum [7.04]
AT1G14830.1 cytosol [7.02]
AT5G07350.1 nucleus [6.98]
AT4G34450.1 golgi [6.92]

AT1G04170.1 cytosol
AT5G20920.1 cytosol
AT5G15200.1 cytosol
AT5G13850.1 cytosol
AT5G02960.1 cytosol
AT4G26230.1 cytosol
AT3G49100.1 cytosol
AT3G46520.1 cytosol
AT3G25520.1 cytosol
AT2G35880.1 cytosol
AT2G25670.1 cytosol
AT1G02780.1 cytosol
AT2G18020.1 cytosol
AT1G76810.1 cytosol
AT1G10590.1 cytosol
AT1G36240.1 cytosol
AT1G25260.1 cytosol
AT2G23940.1 endoplasmic reticulum
AT2G21160.1 endoplasmic reticulum
AT4G24190.1 endoplasmic reticulum
AT4G29520.1 endoplasmic reticulum
AT3G15356.1 extracellular
AT4G28250.1 extracellular
AT5G22360.1 golgi
AT5G06970.1 golgi
AT4G18060.1 golgi
AT5G55660.1 nucleus
AT1G56110.1 nucleus
AT3G23620.1 nucleus
AT3G05060.1 nucleus
AT2G25980.1 nucleus
AT4G32760.1 plasma membrane
AT1G04750.1 plasma membrane
AT5G54110.1 plasma membrane
AT4G32150.1 vacuole
AT3G56190.1 vacuole
AT5G11150.1 vacuole
AT5G39510.1 vacuole

Description (TAIR10)

protein_coding : signal recognition particle-related / SRP-related

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

signal recognition particle-related / SRP-related; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410XPW1	eggNOG:KOG2460	EMBL:AB022212	EMBL:AY051002
EMBL:AY079306	EMBL:CP002688	EnsemblPlants:AT5G61970	EnsemblPlants:AT5G61970.1
entrez:836318	GeneID:836318	GO:GO:0005047	GO:GO:0005786
GO:GO:0005829	GO:GO:0006614	GO:GO:0008312	GO:GO:0030942
Gramene:AT5G61970.1	hmmpanther:PTHR12860	HOGENOM:HOG000231195	IntAct:Q9FH46
InterPro:IPR026258	KEGG:ath:AT5G61970	KO:K03107	ncoils:Coil
OMA:IGDQSAM	Pfam:PF16969	PhylomeDB:Q9FH46	PIRSF:PIRSF038995
Proteomes:UP000006548	Reactome:R-ATH-1799339	RefSeq:NP_568947.1	SMR:Q9FH46
STRING:3702.AT5G61970.1	TAIR:AT5G61970	UniGene:At.20648	UniProt:Q9FH46

Coordinates (TAIR10)

chr5:+:24888920..24893079

Molecular Weight (calculated)

68836.20 Da

IEP (calculated)

9.14

GRAVY (calculated)

-0.54

Length

605 amino acids

Sequence (TAIR10)
(BLAST)

001: MGKKQSEISA MEIDDPKSES SDQILPRFSI NVLQLMKSSQ AQHGLRHGDY ARYRRYCSAR LRRLYKSLKF THGRGKYTRR AILESTVTDV RFLHVVFYMA
101: ERAWSHAMEK RQLPDGPNAR QRIYLVGRLR KAVKWASLFS SLCSIKTDSR TSLEAEAYAS YMKGTLLFEQ DQNWETGLAC FKNARAVYEE LGKYGDLENQ
201: VLCRERVEEL EPSIRYCLHK IGKSNLQTSE LLQIGEMEGP ALDLFKAKIE AAMEEARSQQ AASLTEFSWL GYRFPVSNPK SRVSILKAQE LEKELQSPTA
301: ESLPAEKKLT IFDKLFTAYH DARNTIRSDL VSAGNAESVK DDLNGLDKAV GAVLGQRTIE RNQLLVKVAK SKLNRKRDDK NDKVTRPEEL VRLYDLLLQN
401: VADLSDLISS GRDRKPEEIA FEEECQRTSL AFRAERCFYL AKSYSLAGKR AEAFALYSRA RSLAEDALNK FQSIAKKDEG TIQELKTLIK ECRANSCIEH
501: ATGIMEEERA PENLSNRMST ISLNNTAAQV EEKYLLDKLD VYESAVGDSN TKTAPKIERF PPALQSIPRN PIVLDLAYNC IDFPVIENRM KKKGGFFSSR
601: ISSLW