AT1G73430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 ASURE: golgi What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : sec34-like family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
sec34-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: chloroplast, membrane, cis-Golgi network; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec34-like protein (InterPro:IPR007265); Has 353 Blast hits to 340 proteins in 172 species: Archae - 0; Bacteria - 4; Metazoa - 117; Fungi - 139; Plants - 43; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:27604096..27610829 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 88614.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.22 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||
| Length | 784 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATKAASSSS LPKSGAISKG YNFASTWEQS APLTEQQQAA IVSLSHAVAE RPFPANLVHE HVHRPENGLS VSVEDTHLGD SGAIEAVLVN TNQFYKWFTD 101: LESAMKSETE EKYRHYVSTL TERIQTCDNI LHQVDETLDL FNELQLQHQG VTTKTKTLHD ACDRLLMEKQ KLMEFAEALR SKLNYFDELE NVSSNFYSPN 201: MNVSNSNFLP LLKRLDECIS YIEDNPQYAE SSVYLLKFRQ LQSRALGMIR TYILAVLKTA ASQVQAAFRG TGGNKTSVSE GVEASVIYVR FKAAANELKP 301: VLEEIESRSA RKEYVQILAE CHRLYCEQRL SLVKGIVHQR VSDFAKKEAL PSLTRSGCAY LMQVCHMEHQ LFTHFFPASS EEVSSLAPLV DPLSTYLYDI 401: LRPKLIHEAN IDLLCELVHI LKVEVLGDQS ARQSEPLAGL RPTLQRILAD VNERLTFRAR TYIRDEIANY TPSDEDLDYP AKLEGSPNTT SETDLRDDEN 501: ADVFKTWYPP LEKTLSCLSK LYRCLEQAVF TGLAQEAVEV CSLSIQKASK LIIKRSTTMD GQLFLIKHLL ILREQIAPFD IEFSVTHKEL DFSHLLEHLR 601: RILRGQASLF DWSRSTSLAR TLSPRVLESQ IDAKKELEKC LKTTCEEFIM SVTKLVVDPM LSFVTKVTAI KVALSSGTQN HKVDSVMAKP LKEQAFATPD 701: KVVELVQKVY AAIQQELLPI LAKMKLYLQN PSTRTILFKP IKTNIVEAHT QVESLLKAEY SAEEQANINM ISIQDLQTQL DNFL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)