AT5G58550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ETO1-like 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL2 also interacts with and inhibits the activity of ACS5. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ETO1-like 2 (EOL2); FUNCTIONS IN: protein binding; INVOLVED IN: regulation of ethylene biosynthetic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Tetratricopeptide repeat-containing (InterPro:IPR013026), BTB/POZ-like (InterPro:IPR000210), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT3G51770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:23665451..23668474 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 105483.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.49 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 925 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRNLKLFERF KSTQVHAFTT QDSPSTSSNG SPRMMKFLGH PKSKSRSLLP HGFPTTDLLE PPLDSYLKPI DLVESLSNLY RRIESSSESE ASMLYLEQYA 101: VLRSLGDAKL LRRCLLNARR HAIDVPCKVV FSAWLRFFRR EHELVGVESM DCNGLASECP KTSLTHGCDL NVDDEGCECS TVCEDEFGSD DVKISKADEF 201: SGLDEVSDIS FCVGSEKAKC VRSRIAALSR PFEAMLYGSF VESTTSEIDF SENGISIEAM LALNIYSRIK RVDLFRVETV FELLQLASKF CCDDLKSECE 301: ARLAASVTDL DKALTFVEYA LEERTTLLLS ACLQVFLREL PQSLHNPKVM RFFCSSEAKE QLAFLGSECV FLLYYFLSQV GMEEKLTTDT MLILLERTRE 401: FARTNWQKAL SLHQMGCVLF ERKDYKAAQF HFRLASSLGH VYSLAGVSRT EYKQGKRYSA YRLMNFLISN HKPHGWMYQE RSLYNVGVEK LKDLATATEL 501: DPTLSFPYKY RAVMKFEQKQ IKEAFQEIDR LIQFKLSPEC LELRAWLYLA TGDRESCLRD LRAVLSLEPN YVVFGGKMRD DLVEALTAQC IEVESEADCW 601: VRLFDRWSAV DDVASLAVVH QMLQNDPSKN FLRFRQSLLL LRLNCQGAAM RCLRMAWNLA TSEAERLVYE GWLLYDMGYV EETLTKAEEA ISIQRSFEAF 701: FLKAYALADK NLDADEISCV VQVLEEALKC PSDGLRKGQA LNNLGSIYIN LGMLDQAETA YKNAIEIKHT RARQGLARVY FLKNQRKEAC EEMTKLIEKS 801: CSKAAAYEKR SEYCEREKAK EDLDMATTLD PLRTYPYRYR AAVLMDDQRE TEAVEELSKA IAFRPELQTL HLRAAFHEAT GNLSLATQDC EAALCLDPNH 901: TETLHLYSRS KDQASSIDNT IFGLD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)