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AT5G51690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 1-amino-cyclopropane-1-carboxylate synthase 12
Curator
Summary (TAIR10)
Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.
Computational
Description (TAIR10)
1-amino-cyclopropane-1-carboxylate synthase 12 (ACS12); CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 10 (TAIR:AT1G62960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EC:2.6.1.-eggNOG:COG0436eggNOG:KOG0256EMBL:AB010074
EMBL:AF336920EMBL:AK117323EMBL:BT000463EMBL:BT002111
EMBL:CP002688EnsemblPlants:AT5G51690EnsemblPlants:AT5G51690.1entrez:835243
ExpressionAtlas:Q8GYY0Gene3D:3.40.640.10Gene3D:3.90.1150.10GeneID:835243
Genevisible:Q8GYY0GO:GO:0008483GO:GO:0009058GO:GO:0030170
Gramene:AT5G51690.1gramene_pathway:2.6.1.1gramene_pathway:2.6.1.57gramene_pathway:ASPARTATESYN-PWY
gramene_pathway:PWY-5079gramene_pathway:TYRSYNhmmpanther:PTHR11751hmmpanther:PTHR11751:SF411
HOGENOM:HOG000011234InParanoid:Q8GYY0InterPro:IPR004838InterPro:IPR004839
InterPro:IPR015421InterPro:IPR015422InterPro:IPR015424KEGG:ath:AT5G51690
KO:K14270OMA:AQEKNIHPaxDb:Q8GYY0PDB:2GEA
PDBsum:2GEAPfam:PF00155Pfam:Q8GYY0PhylomeDB:Q8GYY0
PRIDE:Q8GYY0PRO:PR:Q8GYY0PROSITE:PS00105ProteinModelPortal:Q8GYY0
Proteomes:UP000006548RefSeq:NP_199982.2scanprosite:PS00105SMR:Q8GYY0
STRING:3702.AT5G51690.1SUPFAM:SSF53383TAIR:AT5G51690tair10-symbols:ACS12
TMHMM:TMhelixUniGene:At.18827UniGene:At.75220UniProt:Q570P9
UniProt:Q8GYY0
Coordinates (TAIR10) chr5:-:20999015..21000957
Molecular Weight (calculated) 55216.90 Da
IEP (calculated) 7.35
GRAVY (calculated) 0.02
Length 495 amino acids
Sequence (TAIR10)
(BLAST)
001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)