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AT3G14470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.614
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NB-ARC domain-containing disease resistance protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).
Protein Annotations
BioGrid:6004eggNOG:COG4886eggNOG:KOG4658EMBL:AB028617
EMBL:CP002686EnsemblPlants:AT3G14470EnsemblPlants:AT3G14470.1entrez:820670
Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:820670Genevisible:Q9LRR4
GO:GO:0005524GO:GO:0006952GO:GO:0043531Gramene:AT3G14470.1
hmmpanther:PTHR23155hmmpanther:PTHR23155:SF580HOGENOM:HOG000238375InParanoid:Q9LRR4
IntAct:Q9LRR4InterPro:IPR001611InterPro:IPR002182InterPro:IPR003591
InterPro:IPR027417InterPro:IPR032675KEGG:ath:AT3G14470ncoils:Coil
OMA:LRINDCQPaxDb:Q9LRR4Pfam:PF00931Pfam:PF13855
Pfam:Q9LRR4PhylomeDB:Q9LRR4PRIDE:Q9LRR4PRO:PR:Q9LRR4
ProteinModelPortal:Q9LRR4Proteomes:UP000006548RefSeq:NP_188065.1SMART:SM00369
SMR:Q9LRR4STRING:3702.AT3G14470.1SUPFAM:SSF52058SUPFAM:SSF52540
TAIR:AT3G14470UniGene:At.39233UniProt:Q9LRR4
Coordinates (TAIR10) chr3:+:4857940..4861104
Molecular Weight (calculated) 121425.00 Da
IEP (calculated) 8.09
GRAVY (calculated) -0.33
Length 1054 amino acids
Sequence (TAIR10)
(BLAST)
0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)