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AT1G13350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
  • PMID:14617066 (2003): nucleus
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G53640.1); Has 102216 Blast hits to 93482 proteins in 2735 species: Archae - 128; Bacteria - 9335; Metazoa - 43180; Fungi - 13643; Plants - 14516; Viruses - 433; Other Eukaryotes - 20981 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2119-MONOMERBioCyc:ARA:GQT-2120-MONOMEReggNOG:ENOG410XPAXeggNOG:KOG0670
EMBL:AC011810EMBL:CP002684EnsemblPlants:AT1G13350EnsemblPlants:AT1G13350.1
entrez:837895ExpressionAtlas:Q9FX62GeneID:837895GO:GO:0004672
GO:GO:0005524Gramene:AT1G13350.1hmmpanther:PTHR24056hmmpanther:PTHR24056:SF45
HOGENOM:HOG000197082InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
ncoils:CoilPfam:PF00069Pfscan:PS50011PhylomeDB:Q9FX62
PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_563928.3
scanprosite:PS00108SMART:SM00220SMR:Q9FX62STRING:3702.AT1G13350.2
SUPFAM:SSF56112TAIR:AT1G13350UniGene:At.26477UniProt:Q9FX62
Coordinates (TAIR10) chr1:-:4572502..4576547
Molecular Weight (calculated) 87184.40 Da
IEP (calculated) 7.16
GRAVY (calculated) -0.95
Length 761 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSDKHVESN HRKHRRSFSP SDEVFKSPKR HKSRHHHRRH GHRHHRDEEV QYNDDENVNG GDLDMEEGEI LGKEGIGETL KKKLESVDEF GDIKSGQFRE
101: NNLGRNQRRE RECEKRKEIE PDRERRKERG SVDRDSRGDR EKDYLRDRDN DRGRSRDKAR YSSRERGREN ERERRSEKDR DKGREFQSDR EKHKSLDDGY
201: GEVRHKHSGH SRHDAEDDLE LRSPTSVNGH DPNSGDVKET RGNVERTRID NDDKGDVVVW EVEQEDEELN LIEESRRRTQ AIMEKYKKKL EQQNGFSSHD
301: LELANIPKQS STVADVLGSG TLGPVTSAVN QAKAGLDIDA VDGEVAKLSS AVGESPAQLV ISDSDRTLAS TGLGEGSPKD KISDDMFTDD IFGESPADSQ
401: KMGYLRGKGN GIPIVRSGLD DNWDDAEGYY SYQLGELLDD RYEIMATHGK GVFSTVVRAK DTKAELGEPE EVAIKIIRNN ETMHKAGQTE IQILKKLAGS
501: DPENKRHCVR FLSTFKYRNH LCLVFESLHL NLREIVKKYG RNIGIQLSGV RVYATQLFIS LKHLKNCGVL HCDIKPDNML VNEGRNTLKL CDFGSAMFAG
601: TNEVTPYLVS RFYRAPEIIL GLPYDHPLDI WSVGCCLYEL FSGKIMFPGS TNNEMLRLHM ELKGAFPKKM LRKGAFIDQH FDKDLCFYAT EEDSVTRKTT
701: KRMMVNIKPK EFGSVIKQRY KDEDSKLLVH FRDLLDRIFI LDPQKRITVS QALAHPFITG K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)