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AT3G51330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23990937 (2013): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, 4 leaf senescence stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G51350.1); Has 2269 Blast hits to 2259 proteins in 198 species: Archae - 0; Bacteria - 13; Metazoa - 189; Fungi - 203; Plants - 1703; Viruses - 2; Other Eukaryotes - 159 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-429-MONOMEReggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:BT002746
EMBL:CP002686EnsemblPlants:AT3G51330EnsemblPlants:AT3G51330.1entrez:824296
Gene3D:2.40.70.10GeneID:824296GO:GO:0004190GO:GO:0031225
Gramene:AT3G51330.1hmmpanther:PTHR13683hmmpanther:PTHR13683:SF232HOGENOM:HOG000240586
InterPro:IPR001461InterPro:IPR001969InterPro:IPR021109InterPro:IPR032799
InterPro:IPR032861InterPro:IPR033121KEGG:ath:AT3G51330MEROPS:A01.A43
OMA:AMYCLGIPANTHER:PTHR13683Pfam:PF14541Pfam:PF14543
Pfscan:PS51767PhylomeDB:Q84WU7PRINTS:PR00792PROSITE:PS00141
PROSITE:PS51767Proteomes:UP000006548RefSeq:NP_566948.1scanprosite:PS00141
SMR:Q84WU7STRING:3702.AT3G51330.1SUPFAM:SSF50630TAIR:AT3G51330
UniGene:At.874UniProt:Q84WU7
Coordinates (TAIR10) chr3:-:19053480..19056152
Molecular Weight (calculated) 57867.20 Da
IEP (calculated) 4.79
GRAVY (calculated) -0.01
Length 529 amino acids
Sequence (TAIR10)
(BLAST)
001: MVVARQVFVL LSLLVVCWGL ERCEASGKFS FEVHHMFSDR VKQSLGLDDL VPEKGSLEYF KVLAQRDRLI RGRGLASNNE ETPITFMRGN RTISIDLLGF
101: LHYANVSVGT PATWFLVALD TGSDLFWLPC NCGSTCIRDL KEVGLSQSRP LNLYSPNTSS TSSSIRCSDD RCFGSSRCSS PASSCPYQIQ YLSKDTFTTG
201: TLFEDVLHLV TEDEGLEPVK ANITLGCGKN QTGFLQSSAA VNGLLGLGLK DYSVPSILAK AKITANSFSM CFGNIIDVVG RISFGDKGYT DQMETPLLPT
301: EPSPTYAVSV TEVSVGGDAV GVQLLALFDT GTSFTHLLEP EYGLITKAFD DHVTDKRRPI DPELPFEFCY DLSPNKTTIL FPRVAMTFEG GSQMFLRNPL
401: FIVWNEDNSA MYCLGILKSV DFKINIIGQN FMSGYRIVFD RERMILGWKR SDCFEDESLE STTPPPPETE APSPSASTPL PSLLPPPAAA TPPQIDPRNS
501: TRNSGTGTAA NLVPLASQLL LLLPLLAFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)