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AT1G51860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: root hair specific 6 (TAIR:AT1G51880.1); Has 130458 Blast hits to 118907 proteins in 4509 species: Archae - 103; Bacteria - 13378; Metazoa - 43517; Fungi - 9721; Plants - 46311; Viruses - 360; Other Eukaryotes - 17068 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G51860-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IID2
EMBL:AC015448EMBL:CP002684EMBL:FJ708653EnsemblPlants:AT1G51860
EnsemblPlants:AT1G51860.1entrez:841613Gene3D:2.60.120.200Gene3D:3.80.10.10
GeneID:841613Genevisible:C0LGG4GO:GO:0004674GO:GO:0005524
GO:GO:0016021Gramene:AT1G51860.1hmmpanther:PTHR27003hmmpanther:PTHR27003:SF44
HOGENOM:HOG000116550InParanoid:C0LGG4InterPro:IPR000719InterPro:IPR001245
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR024788InterPro:IPR032675iPTMnet:C0LGG4KEGG:ath:AT1G51860
OMA:DINDRTWPaxDb:C0LGG4Pfam:C0LGG4Pfam:PF07714
Pfam:PF12819Pfscan:PS50011PhylomeDB:C0LGG4PIR:A96558
PRIDE:C0LGG4PRO:PR:C0LGG4PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:C0LGG4Proteomes:UP000006548RefSeq:NP_175598.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:C0LGG4
STRING:3702.AT1G51860.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G51860
TMHMM:TMhelixUniGene:At.52143UniProt:C0LGG4
Coordinates (TAIR10) chr1:-:19257634..19261479
Molecular Weight (calculated) 99239.40 Da
IEP (calculated) 6.25
GRAVY (calculated) -0.19
Length 890 amino acids
Sequence (TAIR10)
(BLAST)
001: MKSLHWFLHL LIIAFTVLRS VEAQNQAGFI SLDCGLVPKE TTYTEKSTNI TYKSDVDYID SGLVGKINDA YKTQFQQQVW AVRSFPVGQR NCYNVNLTAN
101: NKYLIRGTFV YGNYDGLNQF PSFDLHIGPN KWSSVKILGV TNTSMHEIIH VVPQDSLEVC LVKTGPTTPF ISSLEVRPLN NESYLTQSGS LMLFARVYFP
201: SSSSSFIRYD EDIHDRVWNS FTDDETVWIS TDLPIDTSNS YDMPQSVMKT AAVPKNASEP WLLWWTLDEN TAQSYVYMHF AEVQNLTANE TREFNITYNG
301: GLRWFSYLRP PNLSISTIFN PRAVSSSNGI FNFTFAMTGN STLPPLLNAL EIYTVVDILQ LETNKDEVSA MMNIKETYGL SKKISWQGDP CAPQLYRWEG
401: LNCSYPDSEG SRIISLNLNG SELTGSITSD ISKLTLLTVL DLSNNDLSGD IPTFFAEMKS LKLINLSGNP NLNLTAIPDS LQQRVNSKSL TLILGENLTL
501: TPKKESKKVP MVAIAASVAG VFALLVILAI FFVIKRKNVK AHKSPGPPPL VTPGIVKSET RSSNPSIITR ERKITYPEVL KMTNNFERVL GKGGFGTVYH
601: GNLDGAEVAV KMLSHSSAQG YKEFKAEVEL LLRVHHRHLV GLVGYCDDGD NLALIYEYMA NGDLRENMSG KRGGNVLTWE NRMQIAVEAA QGLEYLHNGC
701: RPPMVHRDVK TTNILLNERC GAKLADFGLS RSFPIDGECH VSTVVAGTPG YLDPEYYRTN WLSEKSDVYS FGVVLLEIVT NQPVIDKTRE RPHINDWVGF
801: MLTKGDIKSI VDPKLMGDYD TNGAWKIVEL ALACVNPSSN RRPTMAHVVM ELNDCVALEN ARRQGSEEMY SMGSVDYSLS STSDFAPGAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)