AT1G51890.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51860.1); Has 132319 Blast hits to 120399 proteins in 4470 species: Archae - 103; Bacteria - 13631; Metazoa - 43547; Fungi - 9956; Plants - 47012; Viruses - 341; Other Eukaryotes - 17729 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:19274802..19278528 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 98568.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.47 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 876 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MRFLSFLIFV FAVLGLVQAQ DQSGFISLDC GLVPTEITYV EKSTNITYRS DATYIDSGVP GKINEVYRTQ FQQQIWALRS FPEGQRNCYN FSLTAKRKYL 101: IRGTFIYGNY DGLNQLPSFD LYIGPNKWTS VSIPGVRNGS VSEMIHVLRQ DHLQICLVKT GETTPFISSL ELRPLNNNTY VTKSGSLIVV ARLYFSPTPP 201: FLRYDEDVHD RIWIPFLDNK NSLLSTELSV DTSNFYNVPQ TVAKTAAVPL NATQPLKINW SLDDITSQSY IYMHFAEIEN LEANETREFN ITYNGGENWF 301: SYFRPPKFRI TTVYNPAAVS SLDGNFNFTF SMTGNSTHPP LINGLEIYQV LELPQLDTYQ DEVSAMMNIK TIYGLSKRSS WQGDPCAPEL YRWEGLNCSY 401: PNFAPPQIIS LNLSGSNLSG TITSDISKLT HLRELDLSNN DLSGDIPFVF SDMKNLTLIN LSGNKNLNRS VPETLQKRID NKSLTLIRDE TGKNSTNVVA 501: IAASVASVFA VLVILAIVFV VIRKKQRTNE ASGPRSFTTG TVKSDARSSS SSIITKERKF TYSEVLKMTK NFERVLGKGG FGTVYHGNLD DTQVAVKMLS 601: HSSAQGYKEF KAEVELLLRV HHRHLVGLVG YCDDGDNLAL IYEYMEKGDL RENMSGKHSV NVLSWETRMQ IAVEAAQGLE YLHNGCRPPM VHRDVKPTNI 701: LLNERSQAKL ADFGLSRSFP VDGESHVMTV VAGTPGYLDP EYYRTNWLSE KSDVYSFGVV LLEIVTNQPV MNKNRERPHI NEWVMFMLTN GDIKSIVDPK 801: LNEDYDTNGV WKVVELALAC VNPSSSRRPT MPHVVMELNE CLALEIERKQ GSQATYIKES VEFSPSSASD FSPLAR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)