AT3G42880.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G20690.1); Has 99886 Blast hits to 64132 proteins in 3251 species: Archae - 77; Bacteria - 7250; Metazoa - 18347; Fungi - 2712; Plants - 63147; Viruses - 166; Other Eukaryotes - 8187 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:14954587..14956577 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 70252.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.37 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 633 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTAVLFLCFL LICFSFTPSL QNVSESEPLV RFKRSVNITK GDLNSWRTGT DPCNGKWFGI YCQKGQTVSG IHVTRLGLSG TINIEDLKDL PNLRTIRLDN 101: NLLSGPLPPF FKLPGLKSLL LSNNSFSGEI ADDFFKETPQ LKRVFLDNNR LSGKIPASLM QLAGLEELHM QGNQFTGEIP PLTDGNKVLK SLDLSNNDLE 201: GEIPITISDR KNLEMKFEGN QRLCGSPLNI ECDEKPSSTG SGNEKNNTAK AIFMVILFLL IFLFVVAIIT RWKKKRQPEF RMLGKDHLSD QESVEVRVPD 301: SIKKPIDSSK KRSNAEGSSK KGSSHNGKGA GGGPGSGMGD IIMVNSEKGS FGLPDLMKAA AEVLGNGSLG SAYKAVMANG LSVVVKRIRD MNKLAREAFD 401: TEMQRFGKLR HPNVLTPLAY HYRREEKLVV SEYMPKSSLL YVLHGDRGVY HSELTWATRL KIIQGVARGM DFLHEEFASY DLPHGNLKSS NVLLSETYEP 501: LISDYAFLPL LQPNNASQAL FAFKSPEFVQ NQQVSPKSDV YCLGIIVLEV MTGKFPSQYL NTGKGGTDIV EWVQSSIAQH KEEELIDPEI ASNTDSIKQM 601: VELLRIGAAC IASNPNERQN MKEIVRRIER VTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)