AT1G09970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich receptor-like protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
LRR XI-23; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G19700.1); Has 209037 Blast hits to 140396 proteins in 4701 species: Archae - 173; Bacteria - 22554; Metazoa - 63531; Fungi - 11010; Plants - 85931; Viruses - 478; Other Eukaryotes - 25360 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3252408..3255428 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 107385.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.67 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 976 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAPSLRNFNF FHRFSTFLVF SLFSVVSSDD LQVLLKLKSS FADSNLAVFD SWKLNSGIGP CSFIGVTCNS RGNVTEIDLS RRGLSGNFPF DSVCEIQSLE 101: KLSLGFNSLS GIIPSDLKNC TSLKYLDLGN NLFSGAFPEF SSLNQLQFLY LNNSAFSGVF PWKSLRNATS LVVLSLGDNP FDATADFPVE VVSLKKLSWL 201: YLSNCSIAGK IPPAIGDLTE LRNLEISDSG LTGEIPSEIS KLTNLWQLEL YNNSLTGKLP TGFGNLKNLT YLDASTNLLQ GDLSELRSLT NLVSLQMFEN 301: EFSGEIPLEF GEFKDLVNLS LYTNKLTGSL PQGLGSLADF DFIDASENLL TGPIPPDMCK NGKMKALLLL QNNLTGSIPE SYANCLTLQR FRVSENNLNG 401: TVPAGLWGLP KLEIIDIEMN NFEGPITADI KNGKMLGALY LGFNKLSDEL PEEIGDTESL TKVELNNNRF TGKIPSSIGK LKGLSSLKMQ SNGFSGEIPD 501: SIGSCSMLSD VNMAQNSISG EIPHTLGSLP TLNALNLSDN KLSGRIPESL SSLRLSLLDL SNNRLSGRIP LSLSSYNGSF NGNPGLCSTT IKSFNRCINP 601: SRSHGDTRVF VLCIVFGLLI LLASLVFFLY LKKTEKKEGR SLKHESWSIK SFRKMSFTED DIIDSIKEEN LIGRGGCGDV YRVVLGDGKE VAVKHIRCSS 701: TQKNFSSAMP ILTEREGRSK EFETEVQTLS SIRHLNVVKL YCSITSDDSS LLVYEYLPNG SLWDMLHSCK KSNLGWETRY DIALGAAKGL EYLHHGYERP 801: VIHRDVKSSN ILLDEFLKPR IADFGLAKIL QASNGGPEST HVVAGTYGYI APEYGYASKV TEKCDVYSFG VVLMELVTGK KPIEAEFGES KDIVNWVSNN 901: LKSKESVMEI VDKKIGEMYR EDAVKMLRIA IICTARLPGL RPTMRSVVQM IEDAEPCRLM GIVISKESDV KVKEIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)