suba logo
AT4G21390.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : S-locus lectin protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
B120; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61610.1); Has 119638 Blast hits to 117946 proteins in 4361 species: Archae - 104; Bacteria - 13356; Metazoa - 43759; Fungi - 9937; Plants - 34742; Viruses - 415; Other Eukaryotes - 17325 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G21390-MONOMERBioGrid:13182EC:2.7.11.1eggNOG:COG0515
eggNOG:ENOG410IE3DEMBL:AK229175EMBL:AL022603EMBL:AL031187
EMBL:AL161555EMBL:CP002687EMBL:EF637083EnsemblPlants:AT4G21390
EnsemblPlants:AT4G21390.1entrez:827891Gene3D:2.60.120.200Gene3D:2.90.10.10
GeneID:827891Genevisible:O81906GO:GO:0004674GO:GO:0005516
GO:GO:0005524GO:GO:0005886GO:GO:0006468GO:GO:0006952
GO:GO:0009506GO:GO:0016021GO:GO:0030246GO:GO:0048544
Gramene:AT4G21390.1hmmpanther:PTHR27002hmmpanther:PTHR27002:SF95HOGENOM:HOG000116559
InParanoid:O81906InterPro:IPR000719InterPro:IPR000858InterPro:IPR001245
InterPro:IPR001480InterPro:IPR003609InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR024171KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1
KEGG:ath:AT4G21390OMA:YTHGRSEPaxDb:O81906Pfam:O81906
Pfam:PF00954Pfam:PF01453Pfam:PF07714Pfam:PF08276
Pfscan:PS50011Pfscan:PS50927Pfscan:PS50948PhylomeDB:O81906
PIR:T05181PIRSF:PIRSF000641PRIDE:O81906PRO:PR:O81906
PROSITE:PS00108PROSITE:PS50011PROSITE:PS50927PROSITE:PS50948
ProteinModelPortal:O81906Proteomes:UP000006548RefSeq:NP_193870.1scanprosite:PS00108
SMART:SM00108SMART:SM00220SMART:SM00473SMR:O81906
STRING:3702.AT4G21390.1SUPFAM:SSF51110SUPFAM:SSF56112TAIR:AT4G21390
tair10-symbols:B120TMHMM:TMhelixUniGene:At.32633UniProt:O81906
Coordinates (TAIR10) chr4:-:11394458..11397474
Molecular Weight (calculated) 95173.50 Da
IEP (calculated) 6.85
GRAVY (calculated) -0.24
Length 849 amino acids
Sequence (TAIR10)
(BLAST)
001: MRFFRKTSLY LSLFLYFFLY ESSMAANTIR RGESLRDGIN HKPLVSPQKT FELGFFSPGS STHRFLGIWY GNIEDKAVVW VANRATPISD QSGVLMISND
101: GNLVLLDGKN ITVWSSNIES STTNNNNRVV SIHDTGNFVL SETDTDRPIW ESFNHPTDTF LPQMRVRVNP QTGDNHAFVS WRSETDPSPG NYSLGVDPSG
201: APEIVLWEGN KTRKWRSGQW NSAIFTGIPN MSLLTNYLYG FKLSSPPDET GSVYFTYVPS DPSVLLRFKV LYNGTEEELR WNETLKKWTK FQSEPDSECD
301: QYNRCGKFGI CDMKGSNGIC SCIHGYEQVS VGNWSRGCRR RTPLKCERNI SVGEDEFLTL KSVKLPDFEI PEHNLVDPED CRERCLRNCS CNAYSLVGGI
401: GCMIWNQDLV DLQQFEAGGS SLHIRLADSE VGENRKTKIA VIVAVLVGVI LIGIFALLLW RFKRKKDVSG AYCGKNTDTS VVVADLTKSK ETTSAFSGSV
501: DIMIEGKAVN TSELPVFSLN AIAIATNDFC KENELGRGGF GPVYKGVLED GREIAVKRLS GKSGQGVDEF KNEIILIAKL QHRNLVRLLG CCFEGEEKML
601: VYEYMPNKSL DFFLFDETKQ ALIDWKLRFS IIEGIARGLL YLHRDSRLRI IHRDLKVSNV LLDAEMNPKI SDFGMARIFG GNQNEANTVR VVGTYGYMSP
701: EYAMEGLFSV KSDVYSFGVL LLEIVSGKRN TSLRSSEHGS LIGYAWYLYT HGRSEELVDP KIRVTCSKRE ALRCIHVAML CVQDSAAERP NMASVLLMLE
801: SDTATLAAPR QPTFTSTRRN SIDVNFALDS SQQYIVSSNE ITSTVVLGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)